Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766595.2_202014-10-
12] 366 sequences; 11,605,909 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq275 123 3e-23
seq118 114 2e-20
seq242 104 3e-17
>seq275
Length=75988
Score = 123 bits (136), Expect = 3e-23
Identities = 385/588 (65%), Gaps = 26/588 (4%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 29408 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 29467
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 29468 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 29527
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 29528 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 29587
Query 164578 GCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | ||| | | ||| | || || ||||| || |||||||| ||| | ||||
Sbjct 29588 GGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGAG 29643
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|| || || ||| ||||||| || || | || || ||| |||| || |||| |||
Sbjct 29644 TAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGA 29703
Query 164694 ACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAGA 164750
| | | | || ||| | || | | |||||| ||||| |||| |||||| | ||
Sbjct 29704 ATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGGA 29760
Query 164751 TGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--GT 164798
| || ||| ||| | | ||| | | || || || | || || ||
Sbjct 29761 TTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGGGACAATGTAGT 29820
Query 164799 TAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGG 164858
|||||| ||| | ||||||| |||||||| || || ||||||||||| || | ||
Sbjct 29821 TAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGG 29880
Query 164859 TATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATT 164918
||||||||| || |||||||| || |||| | || || || ||| |||| ||| |
Sbjct 29881 TATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGT 29940
Query 164919 GAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
|| | ||||| |||||||| || ||||| | || ||||||||
Sbjct 29941 CCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 29988
>seq118
Length=64440
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 51084 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 51143
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 51144 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 51203
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 51204 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 51246
>seq242
Length=176258
Score = 104 bits (114), Expect = 3e-17
Identities = 367/571 (64%), Gaps = 43/571 (8%)
Strand=Plus/Minus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 110924 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 110867
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| || || | |||||
Sbjct 110866 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATT--TCTGGTGATTTGTT 110809
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 110808 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 110749
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 110748 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 110689
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 110688 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 110633
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 110632 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 110573
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 110572 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 110513
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| |||| ||| ||||| || |||||||| |||
Sbjct 110512 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGTATAACCTGTTTCAATTGATCAATA 110453
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 110452 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 110393
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234
|| || |||| || || | ||| ||| |||
Sbjct 110392 AATCCGTAAACGGGCCCCAGATCTCCTACTT 110362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595869273885600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |