Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766595.2_202014-10- 12] 366 sequences; 11,605,909 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq183 129 5e-25 >seq183 Length=56988 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| || || || || || || ||| | || || || | Sbjct 23937 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 23878 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| |||||| ||||||||||| |||| ||||| Sbjct 23877 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCA 23819 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 23818 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 23759 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || ||||||||||| || |||| || Sbjct 23758 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGG 23711 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| |||||| | |||| ||| || || ||| | ||||| | | ||| || | ||| Sbjct 24051 GATCAACAAAGATTGATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGAT 23992 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 23991 TATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 23939 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 23709 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 23650 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 23649 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 23591 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 23590 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 23531 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 23530 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 23480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425342102699920