Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766615.2_202014-10-
12] 538 sequences; 11,620,179 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq251 116 6e-22
seq87 113 7e-21
>seq251
Length=27141
Score = 116 bits (128), Expect = 6e-22
Identities = 188/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 22914 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 22856
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 22855 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 22796
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || |||||
Sbjct 22795 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 22736
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 22735 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTGTATGCTTTGAAGAGACAAGG 22676
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 22675 TAGAACCTTATATGGTTTCGGTGGTTAA 22648
>seq87
Length=29961
Score = 113 bits (124), Expect = 7e-21
Identities = 188/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 17300 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 17242
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 17241 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 17182
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || |||||
Sbjct 17181 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 17122
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 17121 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 17062
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | || ||||| || ||||||
Sbjct 17061 TAGAACCTTATACGGTTTCGGTGGTTAAT 17033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074708102834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |