Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766615.2_202014-10-
12] 538 sequences; 11,620,179 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq198 138 1e-27
seq27 138 1e-27
seq390 134 1e-26
seq492 122 8e-23
>seq198
Length=47272
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||||||||||||| |||| ||| | ||||| || || ||
Sbjct 29962 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30021
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | |||| ||| ||||| ||||| || || || || ||
Sbjct 30022 GATACCATCGACAACGTTAAGTCGAAAATTCA-AGACAAGGAAGGTATCCCTCCAGATCA 30080
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | || |||||||| || || ||||||| | | | || || ||||||||
Sbjct 30081 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 30140
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || ||||| ||||| | ||||||||||||||||| ||
Sbjct 30141 CATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 30188
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||||||||||||||| ||||||| | || || || || ||
Sbjct 30190 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30249
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | || | ||| |||||| ||||| ||||| || || || || ||
Sbjct 30250 GACACGATCGA-TAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 30308
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | || |||||||| || || ||||||| | | | || || || |||||
Sbjct 30309 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 30368
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| ||||| || || || || ||| | || | ||||| ||
Sbjct 30369 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 30416
Score = 118 bits (130), Expect = 9e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 30874 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 30933
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 30934 GACACTATTGACAACGTTAAGTCGAAAATTCA-AGACAAGGAAGGTATTCCTCCAGACCA 30992
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | ||||||||||| || ||| ||||||||| | | || || || |||||
Sbjct 30993 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 31052
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||||||| || ||||| || ||
Sbjct 31053 TATTCAAAAGGAGTCCACTCTTCA 31076
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 30418 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 30477
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| | ||| | |||| ||| ||||| ||||| ||||| || || ||
Sbjct 30478 GACACTATCGACAACGTTAAGTCGAAAATTCA-AGACAAGGAAGGTATTCCTCCAGATCA 30536
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||||||||| || ||| | ||||| | | | || || ||||| ||
Sbjct 30537 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 30596
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| ||||| || ||| | ||||| ||| | || | ||||| ||
Sbjct 30597 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 30644
>seq27
Length=22794
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||||| |||||||| | || || | ||||| || || |||
Sbjct 8653 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 8712
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| ||||| |||||||||||||
Sbjct 8713 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 8770
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || ||||| ||||||| | | ||| || ||| ||||
Sbjct 8771 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 8830
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || ||||| || || | || | ||||| ||
Sbjct 8831 ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8879
>seq390
Length=28659
Score = 134 bits (148), Expect = 1e-26
Identities = 165/221 (75%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 11121 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 11062
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || |||||||||||||| |
Sbjct 11061 GA--CAATGTCAAGTCAAAGATTCAA-GACAAGGAAGGTATCCCACCTGACCAACAAAGA 11005
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | || || || ||||| ||||||
Sbjct 11004 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 10945
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||||| | || ||||| | || | ||||| ||
Sbjct 10944 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 10904
>seq492
Length=54330
Score = 122 bits (134), Expect = 8e-23
Identities = 160/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||| ||
Sbjct 17111 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 17170
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || ||| ||||| ||||| || |||||||||||||| |
Sbjct 17171 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 17228
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || ||||| || || ||||| ||||| | | | ||| | || ||||| || ||||
Sbjct 17229 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAA 17288
Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| ||||||| || | || ||||||| ||
Sbjct 17289 AGGAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 17328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325158722470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |