Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000766615.2_202014-10- 12] 538 sequences; 11,620,179 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq198 131 2e-25 seq27 123 2e-23 seq492 84.2 2e-11 seq468 82.4 7e-11 >seq198 Length=47272 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || || |||||||||||||| || || || | |||| || | Sbjct 30860 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 30801 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| || || || | ||||||| || || ||||| || || ||||||||| Sbjct 30800 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 30741 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || ||||| || | || | ||||||||||| || || || || || | Sbjct 30740 TCTTGAATCTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 30682 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 30681 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 30646 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 |||||| || || || || || || |||||||| ||||| || || | ||| || Sbjct 31089 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 31030 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 31029 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 30970 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 ||||||| |||| | | | || | || | ||||| ||||| || || || || || | Sbjct 30969 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 30911 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || |||||||||||||| Sbjct 30910 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 30874 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | ||||| ||| || || || || || |||||||| | ||| || Sbjct 30632 CTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCG 30573 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 30572 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 30513 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| |||| | | | || | || | ||||| ||||| || || || || || | Sbjct 30512 TCTTGAA-TTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTAT 30454 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || |||||||||||||| Sbjct 30453 AGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 30418 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 ||||| | ||| ||||| | || || ||||| || || || ||||| | ||| || Sbjct 30179 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 30120 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 || || | || || || || | ||||||| ||| || || || || || ||||| Sbjct 30119 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 30060 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 || ||||||| |||| | | | || | || | ||| |||||||| || ||||| | || Sbjct 30059 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 30001 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| | ||| || || ||||| ||||| Sbjct 30000 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 29962 >seq27 Length=22794 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 8867 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 8808 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 8807 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8748 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| ||||| || ||||| || |||| Sbjct 8747 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 8688 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 8687 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8652 >seq492 Length=54330 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || |||||||||||||| || || || | ||| || Sbjct 17316 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 17257 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 17256 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 17197 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| ||||| || ||||| | ||| | Sbjct 17196 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 17137 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 || || || || | ||| || || || Sbjct 17136 GTCTTACCAGTCAAAGTCTTAACGAA 17111 >seq468 Length=17304 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 9542 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 9601 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 || ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | || Sbjct 9602 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 9661 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 9662 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 9721 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 9722 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 9781 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 9782 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 9841 Query 123141 AAA 123143 ||| Sbjct 9842 AAA 9844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000160278480