Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000767965.1_202014-10- 12] 480 sequences; 11,504,654 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq405 163 2e-35 >seq405 Length=37651 Score = 163 bits (180), Expect = 2e-35 Identities = 372/560 (66%), Gaps = 31/560 (6%) Strand=Plus/Plus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| | ||||| || || ||| ||| || | || ||| | | |||||||| Sbjct 16868 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAAT 16927 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | ||||| || ||||| || ||||| ||||| || || || || | | || Sbjct 16928 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 16987 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || | || ||| ||||||||||| || || || Sbjct 16988 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCC 17047 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218 | ||||||||| || | ||| || || || ||||| | Sbjct 17048 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 17107 Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || ||| || || ||||| ||||| || | ||| || || ||||| || Sbjct 17108 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGC 17167 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| || ||| ||||| |||| ||| | |||||||||||| || || Sbjct 17168 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 17227 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | | ||| ||| | ||| || |||||||||| |||| |||| ||| | || Sbjct 17228 TGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 17286 Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446 | | || |||| |||| || ||||||||||||||||| ||||||||||| || || Sbjct 17287 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 17345 Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506 || |||||| ||| ||||| ||| || | |||||||||||| | ||||||||| Sbjct 17346 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 17405 Query 97507 GCATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 17406 CCGTCCCAAATCTTAACACC 17425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781971313600