Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000767965.1_202014-10- 12] 480 sequences; 11,504,654 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq336 163 3e-35 seq360 125 8e-24 >seq336 Length=17321 Score = 163 bits (180), Expect = 3e-35 Identities = 786/1240 (63%), Gaps = 25/1240 (2%) Strand=Plus/Plus Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||||||||||| || |||| ||| | || ||||||||| || | |||| | ||||| Sbjct 6479 TCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTAT 6538 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || || || || | || | ||||| || | | |||||||| ||||| ||| Sbjct 6539 GGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCA 6598 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATA 110097 || || || ||| | | || | || ||| | || || || | || | || || Sbjct 6599 AAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATG 6658 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || || || ||||| |||||||| | | |||| || | ||| |||| || || | Sbjct 6659 AAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTT 6718 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || ||| || ||||| | || || || ||||| | || | ||| || ||| Sbjct 6719 CTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACA 6778 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT------CCTTA--- 110268 || | |||||||| | ||| | | | | | | || |||| ||| | Sbjct 6779 ACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAA 6838 Query 110269 -TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 || || || || | |||| || || | || || |||| ||| || ||| Sbjct 6839 GTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGA 6898 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | |||||| | |||||| || ||||| || ||| |||||||| ||||| || Sbjct 6899 GCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTT 6958 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 ||||| ||||| ||| || |||||||| || | | | | || ||||||||||| || Sbjct 6959 TGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTT 7018 Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCT 110505 || | | | ||||| | ||||| | ||| || ||| ||| | ||||| Sbjct 7019 TGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATAGTC---TTACCACGACCT 7075 Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 || | |||||| ||| || | ||||||| || | ||||| ||| | ||| Sbjct 7076 TCTTTCTCGTAGCGGGTATATAGTGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCA 7135 Query 110566 TTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || ||| || | |||| | | ||| | ||| || || || | ||||||||| Sbjct 7136 GGAGCTGATGTTGG-AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAA 7194 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || ||||||||||| | || | ||| | || | |||| || || | ||| || Sbjct 7195 AAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTG 7254 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| | | || | ||| || | |||||| | ||||||||||| || || | || Sbjct 7255 GTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGC 7314 Query 110745 GATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || ||| | ||| |||||| |||||| || || ||| |||||| | Sbjct 7315 AAACGCACCAGGTCTT-TTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAA 7373 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | | ||||||||| | || | || ||| |||||||| ||| || | Sbjct 7374 CACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAG 7433 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 | | |||||||| |||||||| | |||||||||||| || || ||| |||| Sbjct 7434 TTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 7493 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | || | | || | ||||| || || || || || |||| |||||| | || | Sbjct 7494 ATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAAC 7553 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 |||| ||||| ||||| || || || |||||||| | || || | || ||| | | Sbjct 7554 AAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-A 7612 Query 111041 ACAGACCTT-GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 | | | || | |||||| ||| || || || | || | | |||| ||||||| Sbjct 7613 AAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGG 7672 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 || || | || |||| ||| | | || ||| || |||| Sbjct 7673 ATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTT 7712 >seq360 Length=14230 Score = 125 bits (138), Expect = 8e-24 Identities = 493/769 (64%), Gaps = 16/769 (2%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || || |||||||| || | ||| || || | ||| || || | || ||||| | Sbjct 6477 GGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACG 6418 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 ||||| ||| ||||| || || || ||| ||||||| || || | || | Sbjct 6417 ATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 6358 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG-AGAAT 110459 || ||||| |||||||| | |||| | || ||||| ||||| ||||||| |||| | ||| Sbjct 6357 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAAT 6299 Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | ||| | | ||| | ||| ||| | ||||||| ||||| Sbjct 6298 GGCATACCACAACTTTTGGGCTTTAATTGTT---TTACCACGACCTTCTCTTTCGTAACG 6242 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 || || | || |||||||| | || |||||||| | ||| || ||| Sbjct 6241 AGTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGG 6182 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 | || | | ||| | ||| || || || | ||||||||| || ||||||||||| Sbjct 6181 TGAAAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 6122 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || | ||| | || | |||| || || | ||| ||||| | | || Sbjct 6121 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 6062 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA------GACAGCGATGGATCC 110753 | ||| || | |||||| | |||||||| || || | || ||| | || Sbjct 6061 AATAAAATCAAAGATATCTGCATGCCATGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCT 6002 Query 110754 CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGG 110813 ||| || || |||||| ||||| || || || |||||| || | | |||||| Sbjct 6001 CTTGTTACCAC---CCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGG 5945 Query 110814 AATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACTTATTGGCACGAATGT 110872 ||| | || | || ||| || ||||| | | | | || | ||| ||| |||| Sbjct 5944 AATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCT-GTGGAACGGATGT 5886 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 || |||||| | ||||| |||||| || || ||| ||||| ||| | | | Sbjct 5885 TGTTGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAG 5826 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 || |||||||||| || || || || |||| |||||| || || || |||||||| | Sbjct 5825 TATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAACTAAGAAACATGAAGACATTT 5766 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 ||||| | ||||| || || ||||| | || || | || ||| |||| Sbjct 5765 GAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA 5717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972466144000