Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000767965.1_202014-10- 12] 480 sequences; 11,504,654 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq432 150 2e-31 seq235 147 2e-30 seq186 109 5e-19 seq437 104 2e-17 >seq432 Length=22805 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||||||||| |||||||| || ||||| ||| | | Sbjct 14178 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 14119 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 14118 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 14059 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 14058 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 13999 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || ||||||||||| ||| ||||| | || || || Sbjct 13998 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 13948 >seq235 Length=28978 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| ||||| || || ||||| || || || || ||| | || Sbjct 12356 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 12415 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| ||| || ||||| |||||||| || ||||| ||||| Sbjct 12416 GACACTATTGACAACGTCAAAAGTAAA-ATTCAAGATAAAGAAGGTATCCCTCCGGATCA 12474 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || || || || || ||| |||| | |||| || || || Sbjct 12475 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 12534 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || |||||||||||| ||||| | || || Sbjct 12535 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 12582 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || ||||| ||||| || || || || ||| | | Sbjct 12584 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 12643 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| ||||| || |||||||| ||||| || ||||| || || Sbjct 12644 GACACTATTGACAACGTTAAGTCAAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCA 12702 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||||||| ||||| || || ||| |||| |||| || || || Sbjct 12703 GCAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 12762 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || || ||| | || ||| | ||| | || || Sbjct 12763 TATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTTGAGGGGTGG 12810 Score = 127 bits (140), Expect = 2e-24 Identities = 156/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||||||||| || || | ||||| ||| | || Sbjct 11895 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 11954 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||| || |||||||| ||||| || ||||| ||||| Sbjct 11955 GATACCATCGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 12013 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | |||||||||||||| || ||||| || || |||| |||| ||||| || Sbjct 12014 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 12073 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||| ||||| || || |||| |||| Sbjct 12074 CATTCAGAAGGAGTCCACCTTACATCTTG 12102 Score = 116 bits (128), Expect = 3e-21 Identities = 120/156 (77%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 24775 AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGAT 24834 |||| ||| | ||| || |||||||| ||||| || ||||| ||||||||| | ||||| Sbjct 12200 AACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGAT 12258 Query 24835 CTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGA 24894 ||||||||| || || ||||| || |||| |||| |||||||||||||| || || Sbjct 12259 CTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGA 12318 Query 24895 ATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || | || ||||||||| ||||| | || || Sbjct 12319 GTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 12354 >seq186 Length=80871 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | | ||||| | || | || || | Sbjct 44670 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCA 44729 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || || || || |||||| | ||||||||||| || || Sbjct 44730 AAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 44789 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| || |||| | |||| || || ||||||||||| ||||| || | ||| Sbjct 44790 CAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTGCAC 44849 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| ||||| | || || Sbjct 44850 TTAGTCTTGAGATTGAGAGGTGG 44872 >seq437 Length=103735 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || | || ||||| || || || | ||||| ||| | | ||||| | || | Sbjct 61736 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 61677 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||||||||| ||||| || || || || |||||| | ||||||| Sbjct 61676 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 61617 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || || || |||| || |||| | || || || ||||| |||||||||| Sbjct 61616 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAAT 61557 Query 24897 CGACACTACACTTGGTGTTGCGATT 24921 | || |||| ||||| ||| |||| Sbjct 61556 CCACTTTACATTTGGTCTTGAGATT 61532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894900614400