Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000767965.1_202014-10- 12] 480 sequences; 11,504,654 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq360 111 2e-19 >seq360 Length=14230 Score = 111 bits (122), Expect = 2e-19 Identities = 284/430 (66%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| | ||||||||||||||| || ||||| ||||| Sbjct 5714 TACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCT 5773 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| | || || |||||||||||||| ||||| || || || || || | || Sbjct 5774 TCATGTTTCTTAGTTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAA 5833 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 || ||||| || ||||| | |||||| | ||| | || | ||| ||||| Sbjct 5834 GAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGT 5893 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 | | || | ||| || || ||||| | | || | | |||||| | Sbjct 5894 TCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATT 5953 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || || ||||| || || ||||| || || ||||||||||| ||| | || | Sbjct 5954 CGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCT 6013 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 |||||| | | ||| ||||| ||||| || || || | || ||| | || | | | Sbjct 6014 TTCGCCCTTTTCCTGGAGCCATGGCATGCAGATATCTTTGATTTTATTGATATTAGGAAG 6073 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGA 53688 || || ||| | || || || || ||| | || |||| | ||||| |||||||| || Sbjct 6074 AACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGA 6132 Query 53689 CCTCTTCATG 53698 || |||||| Sbjct 6133 TCTTTTCATG 6142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212716704000