Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10-
12] 1,348 sequences; 11,377,261 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq108 360 2e-94
seq1166 185 1e-41
>seq108
Length=7374
Score = 360 bits (398), Expect = 2e-94
Identities = 1337/2077 (64%), Gaps = 55/2077 (3%)
Strand=Plus/Minus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 2934 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 2875
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCT 52921
| | || ||||||||||||||||||||||||||||||| ||| | ||
Sbjct 2874 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 2815
Query 52922 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 52979
| || | ||| |||| ||| ||| |||||| || || | | || || ||||
Sbjct 2814 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 2758
Query 52980 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 53038
| || ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||
Sbjct 2757 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 2699
Query 53039 TCTGGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TG 53092
| ||||| |||| || | ||||| || ||| | | ||||| || || |
Sbjct 2698 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 2642
Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152
|| | |||| ||| | | || || | | || | | || || || ||
Sbjct 2641 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 2582
Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212
|| ||||| || || || || | || | ||| ||||| || ||||| | | |
Sbjct 2581 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 2522
Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272
||||||| ||||| ||||| | || |||||||| ||||| ||||||| || |
Sbjct 2521 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 2462
Query 53273 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 53329
||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | |
Sbjct 2461 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 2405
Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 53389
| ||| ||||| ||||| | | || ||||||
Sbjct 2404 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 2345
Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449
| || ||||||| || ||||||| ||||||||||||| || || | | | | |
Sbjct 2344 AAAGTTCCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 2285
Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509
||||| ||||| ||||| | ||||||| | |||||| ||||||||| ||
Sbjct 2284 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 2225
Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569
||| || || || | ||| || | ||||||||||| | | | || ||||||||||||
Sbjct 2224 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 2165
Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629
|||| || || |||||| || ||| || |||||| ||| || | | | || |
Sbjct 2164 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 2105
Query 53630 TTTCTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTAT 53688
|| | || ||||| | | || | | | ||| ||| | | ||| | | |
Sbjct 2104 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCT 2047
Query 53689 TACAAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGG 53729
||| | | | ||||||| ||| || |||| |||||||| |
Sbjct 2046 TACCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAG 1987
Query 53730 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATG 53788
|| |||| | | | | |||| | || ||| ||| ||| || | ||||||||
Sbjct 1986 CTGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATG 1928
Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848
||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| ||
Sbjct 1927 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 1868
Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908
|||||||||||| | || | ||| | ||| | | ||| | | || || || |
Sbjct 1867 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---A 1811
Query 53909 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAA 53968
| || | |||| | ||||| | ||||| | ||||||||||| || ||
Sbjct 1810 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 1751
Query 53969 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028
|| | || |||||| | ||| | | || | ||| || | || |
Sbjct 1750 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 1691
Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088
|| || ||||| || |||||||||||||| ||||| || | |||||| | | | |
Sbjct 1690 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 1631
Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148
||||| || || ||||| ||| ||| | || | | ||||||| |||||| |||
Sbjct 1630 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGT 1571
Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208
|||| ||| | || | | ||||| | ||| || || ||||| || | || | |||
Sbjct 1570 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCG 1511
Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268
|||||||| |||| | | ||| ||||| | ||| || || | ||| || || || |
Sbjct 1510 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 1451
Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328
|| || ||| | | |||||| ||| || |||||| || || || || ||||
Sbjct 1450 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 1391
Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388
|| || || || ||| || || || || || || ||||| ||| || ||| |||||
Sbjct 1390 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 1331
Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448
|| | ||||| |||||||| | ||| || ||||| || || || |||
Sbjct 1330 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 1271
Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508
|| ||||| ||||| ||||| ||| | | || ||||| || | ||| | || |||
Sbjct 1270 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 1211
Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568
|| | || || |||| |||||| | ||| | | || || || | ||| ||| |
Sbjct 1210 TCTCTACCGTGGATGCCTAGTGCGACTCTCATGATTAAATGTTGTGGACGTTCGGCGA-C 1152
Query 54569 TTGTT-GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627
||| ||| ||| | || || || || |||||||||||||||||||||||| ||||
Sbjct 1151 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 1092
Query 54628 -TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686
|||||| |||| || || | ||| | ||||| | ||||||||| | || | || |
Sbjct 1091 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 1033
Query 54687 CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746
|| | | | || || || |||| | || ||| | || |||||| ||
Sbjct 1032 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 973
Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATA 54806
|| | | ||| | | |||| | |||| ||||| | |||| ||| |||| ||| || |
Sbjct 972 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 913
Query 54807 CGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||| |||||||| ||||| |||| ||||| |||||
Sbjct 912 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 876
>seq1166
Length=6891
Score = 185 bits (204), Expect = 1e-41
Identities = 399/594 (67%), Gaps = 6/594 (1%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||||||||
Sbjct 6701 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 6642
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| || | |||||||| | || | |||||| | ||| || ||||| ||||| || ||
Sbjct 6641 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 6582
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG--- 24302
|| || || | ||||| | | |||||||||| |||||||| ||| | ||||
Sbjct 6581 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 6522
Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362
||| || ||||| || |||||| |||||||||| | || || || |
Sbjct 6521 GCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGA 6462
Query 24363 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 24422
|| ||||| || | | | |||| ||| || || | || ||||| ||||| |
Sbjct 6461 ATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAG 6402
Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482
|| |||| || ||||| |||||||| ||||| || |||||||||| | |||
Sbjct 6401 GAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCC 6342
Query 24483 TCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 24542
|| | ||| || ||||| | | || ||| | || |||||||| || || ||||||
Sbjct 6341 TCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCA 6282
Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGT 24599
|| || ||||| || | || || ||| || | ||| ||| || ||
Sbjct 6281 GAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATTCTG 6222
Query 24600 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 24659
|| ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || ||
Sbjct 6221 TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGCT 6162
Query 24660 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713
|| || || || | |||||| ||||| || | || || |||| ||||
Sbjct 6161 TCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 6108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593711595791040
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