Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq585 138 2e-27 seq1166 100 6e-16 >seq585 Length=14830 Score = 138 bits (152), Expect = 2e-27 Identities = 250/362 (69%), Gaps = 24/362 (7%) Strand=Plus/Plus Query 35270 GAACTCTCGTGGTTCAT--CAGGGGCAATACAGACGCCAAAGAATTGGCCAAG-AAGAAG 35326 ||||| | |||||| | |||| | |||||||||| || |||| | || ||| | Sbjct 11655 GAACTATTGTGGTTTTTGGCAGGTG--ATACAGACGCTAACCTATTGTCTGAGCAAGGTG 11712 Query 35327 ATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGAT 35386 || | || ||| ||| |||||| || || |||| ||| || | | ||||| | ||| Sbjct 11713 TTA-AGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATGGGGTTCAAAGAT 11771 Query 35387 AGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAA 35446 || || |||||| |||| ||||| |||||||| |||||| | |||||||||||| || Sbjct 11772 AGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTGCTAAA 11831 Query 35447 TATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTG-GCCA------- 35498 || | || || | ||| ||||||||| | ||||||||||||||| || Sbjct 11832 TACAAGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTTATT 11891 Query 35499 -ATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGG 35557 ||| ||||||||| |||||| | |||||||| || ||||||| || ||| Sbjct 11892 CATAAACTAAAGAC---------AAATCCCTACGATAGAAGAATCATTATGAGTGCCTGG 11942 Query 35558 AATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTAT 35617 || || ||| || || |||||| | || |||||||| || | | || || ||| Sbjct 11943 AACCCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTAT 12002 Query 35618 GT 35619 || Sbjct 12003 GT 12004 >seq1166 Length=6891 Score = 100 bits (110), Expect = 6e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| | ||||||| |||| || ||| | || || |||||||||||| Sbjct 6547 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 6606 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||||| |||| ||| | |||| ||||| || || || | ||| ||| Sbjct 6607 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 6666 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 |||||| | || ||||||||||||| || |||| Sbjct 6667 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTT 6701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566908647340