Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1166 132 5e-26 >seq1166 Length=6891 Score = 132 bits (146), Expect = 5e-26 Identities = 337/508 (66%), Gaps = 11/508 (2%) Strand=Plus/Minus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 6671 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 6612 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || ||||| || || | ||||| || ||||| || || | || |||| | ||||| Sbjct 6611 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 6552 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072 || | || || ||| |||||| | || | || |||||| || ||||||||| Sbjct 6551 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCG 6492 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTA 14132 | || | || || || | ||| ||||| || || |||| | |||||| Sbjct 6491 GCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA 6432 Query 14133 G--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCA 14190 | | ||||| |||| ||||| || | ||| || |||||||||| || ||||| | Sbjct 6431 GGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAA 6374 Query 14191 TAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATC 14250 | || || ||||| || || | | || || | ||| ||||| | | | || Sbjct 6373 TCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGT 6314 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14310 |||| |||| ||||||||||| ||||| ||| ||| || ||||| || | | | Sbjct 6313 TTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGG 6254 Query 14311 TAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATC--GGATAAATCCTTAGA 14365 ||| || || ||| | | ||| | | || ||||| || |||| ||||||||| Sbjct 6253 AAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGAT--ATCCTTAGA 6196 Query 14366 AAGATCTACTTCATCAACTGTCCAAAAA 14393 | ||| | ||| ||| | ||||| ||| Sbjct 6195 CAAATCAATTTCTTCAGCGGTCCAGAAA 6168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479719916583200