Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1166 143 3e-29 >seq1166 Length=6891 Score = 143 bits (158), Expect = 3e-29 Identities = 337/506 (67%), Gaps = 7/506 (1%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 6671 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 6612 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || || | || || || ||||| || || | || |||| | ||||| Sbjct 6611 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 6552 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 || | ||||| ||| |||||| | || | || | |||||| || ||||||||| Sbjct 6551 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCG 6492 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920 | || | || || || | || |||||||| || ||| | |||||| Sbjct 6491 GCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA 6432 Query 13921 G--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTA 13978 | | ||||| |||| ||||| || | ||| || |||||||||| || ||||| | Sbjct 6431 GGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAA 6374 Query 13979 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATC 14038 | || || ||||| || |||| | || |||| ||| || || | | | || Sbjct 6373 TCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGT 6314 Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098 |||| |||||||||||||||||||||| ||| ||| || ||||| || | | | Sbjct 6313 TTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGG 6254 Query 14099 TAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAA 14155 ||| || || ||| | | ||| | | || ||||| || | ||||||||| | Sbjct 6253 AAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACA 6194 Query 14156 GATCTACTTCATCAACTGTCCAAAAA 14181 ||| | ||| ||| | ||||| ||| Sbjct 6193 AATCAATTTCTTCAGCGGTCCAGAAA 6168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478580735778720