Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10-
12] 1,348 sequences; 11,377,261 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq308 93.3 4e-14
>seq308
Length=17113
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041
|||| || || || ||||| || ||||| || || || || ||||| ||||||
Sbjct 6065 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 6006
Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101
||||| ||| |||||| | |||||| || ||||| || ||||| ||||| |||||||
Sbjct 6005 TTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTT 5946
Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161
|| | | || | ||||| | | ||| || || | || | ||||| || |||
Sbjct 5945 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 5886
Query 143162 AATGTTTTTACGAATATTTGCATA 143185
| ||| || ||||| |||||||||
Sbjct 5885 AGTGTCTTCACGAAAATTTGCATA 5862
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 5603 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 5544
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 5543 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 5484
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | ||| ||||| | || | || || |||||||| ||
Sbjct 5483 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 5424
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 5423 TTGACGAAAATCTGCATA 5406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507005856807360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |