Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1166 136 3e-27 >seq1166 Length=6891 Score = 136 bits (150), Expect = 3e-27 Identities = 363/549 (66%), Gaps = 23/549 (4%) Strand=Plus/Minus Query 13142 AACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAA 13201 |||| || |||||||| || |||||| ||||| ||||||| || | ||||| ||| Sbjct 6701 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 6642 Query 13202 AATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC 13261 || |||| ||| ||||| | |||| ||||| | ||| || || | ||||| ||||| Sbjct 6641 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 6582 Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTT 13321 || ||||| | ||||||| | ||||| || | | ||||||||| || | | Sbjct 6581 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA-AGGCGTC 6523 Query 13322 TTACTCTCT-ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC----ATAT 13376 ||| ||||| || ||||| | || || | || | ||| || Sbjct 6522 AGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTCTGGGATGG 6467 Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436 | | || || || || || | | |||| ||| ||| || |||||||| |||| Sbjct 6466 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 6407 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496 | ||| || |||| || ||||||||||| ||| ||||||||||| || |||| Sbjct 6406 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 6347 Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556 | ||||||| | || ||||||| | | || |||| | |||||||| ||||| || | Sbjct 6346 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 6287 Query 13557 CGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---tttttttCGTT-- 13608 ||||| ||| || ||||| ||||| | || | | |||| | || ||||| Sbjct 6286 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 6227 Query 13609 TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 ||||| || ||| || | | ||| || || ||||| | || ||| ||||||| Sbjct 6226 TTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 6172 Query 13669 AAAAGAAGC 13677 |||||||| Sbjct 6171 GAAAGAAGC 6163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430975319497896