Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10-
12] 1,348 sequences; 11,377,261 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1166 136 3e-27
>seq1166
Length=6891
Score = 136 bits (150), Expect = 3e-27
Identities = 363/549 (66%), Gaps = 23/549 (4%)
Strand=Plus/Minus
Query 13142 AACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAA 13201
|||| || |||||||| || |||||| ||||| ||||||| || | ||||| |||
Sbjct 6701 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 6642
Query 13202 AATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCC 13261
|| |||| ||| ||||| | |||| ||||| | ||| || || | ||||| |||||
Sbjct 6641 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 6582
Query 13262 GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTT 13321
|| ||||| | ||||||| | ||||| || | | ||||||||| || | |
Sbjct 6581 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA-AGGCGTC 6523
Query 13322 TTACTCTCT-ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC----ATAT 13376
||| ||||| || ||||| | || || | || | ||| ||
Sbjct 6522 AGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTC----ACCGATTTCTGGGATGG 6467
Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436
| | || || || || || | | |||| ||| ||| || |||||||| ||||
Sbjct 6466 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 6407
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496
| ||| || |||| || ||||||||||| ||| ||||||||||| || ||||
Sbjct 6406 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 6347
Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556
| ||||||| | || ||||||| | | || |||| | |||||||| ||||| || |
Sbjct 6346 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 6287
Query 13557 CGTCACTAGCAGCaaaaaaaGCAAG---TATGTGCTTAATAAAt---tttttttCGTT-- 13608
||||| ||| || ||||| ||||| | || | | |||| | || |||||
Sbjct 6286 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 6227
Query 13609 TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668
||||| || ||| || | | ||| || || ||||| | || ||| |||||||
Sbjct 6226 TTCTG-----TTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 6172
Query 13669 AAAAGAAGC 13677
||||||||
Sbjct 6171 GAAAGAAGC 6163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430975319497896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |