Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1299 196 1e-44 seq108 188 2e-42 seq585 125 2e-23 >seq1299 Length=15423 Score = 196 bits (216), Expect = 1e-44 Identities = 1069/1680 (64%), Gaps = 47/1680 (3%) Strand=Plus/Plus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 || || | |||| || ||||| |||||||| ||||| ||||| || ||| | Sbjct 5533 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 5592 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | | || ||||| | | ||||| || |||||| || |||||||||| || | Sbjct 5593 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 5652 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543 ||||||||| | ||| | || | | | | | || ||||| || | || | Sbjct 5653 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 5710 Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 | || ||||| |||||| | ||||| | | ||| ||||| || | |||| || |||| Sbjct 5711 GATACTTCACTCACGCCTCTCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 5770 Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 |||| || |||||| | |||||||| || || ||||| ||||| | ||| || | Sbjct 5771 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 5829 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 || | |||||| | |||||||| | |||||| || ||||| | ||| |||| | Sbjct 5830 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 5889 Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777 ||| | |||| ||| || ||| || || || |||| | || ||| || |||| Sbjct 5890 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 5946 Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837 ||| ||||||| || | |||||||| | || || ||||||||||| ||| | Sbjct 5947 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 6006 Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || || || | | | ||||| ||||| ||||| || || ||| | || || Sbjct 6007 GGTGCCTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 6066 Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 | |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| | Sbjct 6067 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 6125 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016 |||| | ||| ||||| || || | | | | | |||| | | |||| || || Sbjct 6126 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTTCGCC-CA 6184 Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 || || |||| | ||||| |||||||| || | || | ||||| | Sbjct 6185 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 6244 Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 | ||| || ||| | | | |||| |||||| || || ||| | |||| |||||| Sbjct 6245 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 6300 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || | | |||| || ||||| ||||| | ||| | || || || | || ||| | Sbjct 6301 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 6360 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253 ||| | ||||| ||| || | ||||| || || | | || ||||| || || | Sbjct 6361 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAATTTATGTTGTGAAATCGT 6419 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||| || | || || || ||||| || ||||| | || || || || || || || Sbjct 6420 CGAATATTCCTCCCCTGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 6479 Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTA-----TG-ACGT 364358 || || | ||||||||| || | | || | | || ||| Sbjct 6480 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGAGAGATTGCACGA 6539 Query 364359 AAC--CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413 | ||| |||| |||| ||| | ||| ||||||||| ||||| |||||| Sbjct 6540 GATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCCA 6597 Query 364414 ATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGC 364473 |||| || || ||| |||||| ||| | || |||| ||||||||| ||||| Sbjct 6598 GTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGT 6657 Query 364474 CTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTA 364533 | || || || ||||||| | | | ||||| ||| || |||| |||| Sbjct 6658 TTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCTA 6717 Query 364534 AATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA 364593 || || | ||||| ||||| || || ||| | | || || ||||| ||||| Sbjct 6718 AACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCC 6777 Query 364594 -AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 |||| |||| ||| || ||||||| ||| || || || ||| |||| | || || Sbjct 6778 CAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTACA 6836 Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA 364712 || ||| | ||||| | | |||| || | ||| | ||||| || || | | Sbjct 6837 ATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGGA 6896 Query 364713 CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTAC 364772 | || || ||||| | ||||| | || || || ||||| || || || || Sbjct 6897 CATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAAC 6956 Query 364773 TGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACG 364832 | | || || || || | || || || |||||||| | || || | || || || Sbjct 6957 TTCCCAAATTCTTGGTTATAATGAATGTTTCGAACCAGTGACCTCAAACATGTACTCTCG 7016 Query 364833 CCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGA 364892 || || || || || ||||| | || |||||| || || | ||| | ||| Sbjct 7017 TCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCGA 7076 Query 364893 CCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCA 364952 || || | |||| ||| || ||||| | ||| | || | ||||||||| | || Sbjct 7077 CCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTCA 7136 Query 364953 GAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012 | | ||| | ||| |||| | ||| | ||||||||||| |||||||| || Sbjct 7137 AGGCTTACCAAATGTGCCACAAGAATTAAAGGAATTATACAAAACCGTCTGGGAAATCTC 7196 >seq108 Length=7374 Score = 188 bits (208), Expect = 2e-42 Identities = 696/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 1257 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 1316 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 1317 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 1375 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 1376 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 1435 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 1436 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 1490 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || || || | || || ||||||||||| | |||| | | Sbjct 1491 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 1548 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 1549 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 1608 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 1609 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 1668 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 1669 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 1728 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 1729 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 1788 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 1789 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 1844 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 1845 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 1904 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 1905 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 1960 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || || || || |||||| | || || | || | || || Sbjct 1961 TGAATACTCAGCTCCAGATGAAACAGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 2020 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 2021 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 2076 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 2077 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 2136 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 2137 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 2195 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 2196 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 2255 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| Sbjct 2256 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 2311 >seq585 Length=14830 Score = 125 bits (138), Expect = 2e-23 Identities = 340/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Plus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 11711 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGGTTCAAAG 11769 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || |||||||||||||||||| | || |||||||| Sbjct 11770 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTGCTA 11829 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| | | ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 11830 AATACAAGA-CGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 11888 Query 111597 ATTGATCAAATTAAGA-ACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || || | |||| | | ||| || | | | || ||||||||||| |||||||| Sbjct 11889 ATTCATAAACTAAAGACAAATCCCTAC-GATAGAAGAATCATTATGAGTGCCTGGAACCC 11947 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | || ||||| ||| || | | ||||| |||| Sbjct 11948 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 12007 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 12008 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 12067 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| |||||| || | || || || ||||| |||||| || || | | ||| | Sbjct 12068 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 12127 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 12128 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 12187 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 12188 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 12221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303331089454136