Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1166 86.0 1e-11 >seq1166 Length=6891 Score = 86.0 bits (94), Expect = 1e-11 Identities = 345/532 (65%), Gaps = 15/532 (3%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571 ||||||||| ||||| |||||| || | ||||| || | | |||| || | || Sbjct 6171 CTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAA 6230 Query 25572 AGA---CGAGCAGCATTTTC---TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625 || |||| || ||||| || || || | || || || || || ||||| || Sbjct 6231 CGAGAACGAG-AGATTTTTCATTTCCAGA--GTTCTTGCCTTTTTCGCCGCTTCTGACGG 6287 Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 ||| || || || || || || | ||| ||| ||||| || ||||| || Sbjct 6288 TATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAA 6347 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 | |||||||||||||||| || || |||||| | |||||||| || || | | Sbjct 6348 GAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTT 6407 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 | ||| || ||||| | ||| || || || |||| |||||| | Sbjct 6408 GATCGAT-ACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACA 6466 Query 25805 ACATACCCAGCATCAAGAG-GAAGGCGCGGTGGGCCATGAAGTGGATC-AACAGCCAGAG 25862 ||| ||||| | | | |||||| ||||| | | |||||| || | | || Sbjct 6467 CCAT-CCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATCCAAGACGCTGA- 6524 Query 25863 CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG 25922 ||| |||||| || | || || |||||||| | | || || |||||||| ||| Sbjct 6525 CGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGG 6584 Query 25923 TTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 ||| ||||| |||| |||||| | || ||| || | |||||||| | |||||| Sbjct 6585 TTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTC 6644 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 |||||| | ||| | || ||||| ||| | |||| || ||||| ||| || Sbjct 6645 CAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTTG 6696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928829148965120