Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq108 324 2e-83 >seq108 Length=7374 Score = 324 bits (358), Expect = 2e-83 Identities = 917/1391 (66%), Gaps = 42/1391 (3%) Strand=Plus/Plus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||| | |||||| | ||||||||||| ||| || || ||| || || || || Sbjct 1177 TCATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATA 1236 Query 75285 ACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 75343 || |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| Sbjct 1237 ACTTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACT 1295 Query 75344 CCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 75403 |||| ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || Sbjct 1296 CCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGG 1355 Query 75404 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 75463 || || | || | | ||| ||||| || || || ||||| |||||||| | Sbjct 1356 ATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 1415 Query 75464 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 75523 || |||||| | | | | | | ||| ||| || ||||| ||| || | Sbjct 1416 CATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAAC 1475 Query 75524 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGG 75583 ||| | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 1476 GGTTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGT 1535 Query 75584 CGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | ||| ||| | | || | ||| |||||||||||||||| |||||| | || Sbjct 1536 AATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGA 1594 Query 75640 GTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTT 75698 || |||| ||| || ||||| ||| | || || ||| |||||| | || Sbjct 1595 TTTTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCC 1653 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 | | || |||||||| || |||||||||||||| || || || ||| ||| | Sbjct 1654 CTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACAT 1713 Query 75759 TTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817 | |||| |||| ||| || || ||| | ||| ||||| |||||||| || Sbjct 1714 TATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCT 1772 Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877 || || || || || | || ||| | | || |||| | |||| | | Sbjct 1773 CTATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTA 1829 Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | | ||| | || | || || || ||||| ||||| | | ||||||||||| Sbjct 1830 TGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGAT 1889 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 1890 GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGC 1949 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | Sbjct 1950 TGTGAAATTGTTGAATACTCAGCTCCAGATGAAACAGCTGTTTGTAACTTGGCTTCCGTT 2009 Query 76058 GCCCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTAT 76102 ||| | ||| | || ||| |||| ||||| ||| | | | Sbjct 2010 GCCTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTC 2066 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 ||||| | |||||||| | || ||||||| ||| ||||| |||||||||| | Sbjct 2067 AAAAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGT 2126 Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 |||| || || ||||| ||| |||| || |||||| |||| ||||| |||| |||| Sbjct 2127 AATTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTG 2186 Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282 ||||||||||||||||| || || || ||| || | |||||||||| || ||| Sbjct 2187 GGTGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAA 2246 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 ||| | | ||| | ||||||||||| || ||||| || ||| |||| || | Sbjct 2247 GCCCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCT 2306 Query 76343 TGTGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 |||||| | ||| |||| | ||| | || | || || | || ||||| || || | Sbjct 2307 TGTGAACTAGCTCAGAAG--GACGGTCCATACGGAACTTTCCAAGGATCTCCTGCTTCTC 2364 Query 76401 AAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATG 76460 |||| | || ||||||||||||||||| || || | || | || ||||| Sbjct 2365 AAGGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-C 2423 Query 76461 TTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAA 76517 || ||| || | |||| | || | ||| || | | | || || |||||||||| Sbjct 2424 ACCTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAA 2481 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 |||| || || ||||| | ||||| |||||| |||||||||| || |||||| ||| Sbjct 2482 TGCCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTT 2541 Query 76578 CAAACATCTAC 76588 | || || ||| Sbjct 2542 CCAATATGTAC 2552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559547802240