Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000768095.1_202014-10- 12] 1,348 sequences; 11,377,261 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq108 251 8e-62 >seq108 Length=7374 Score = 251 bits (278), Expect = 8e-62 Identities = 886/1370 (65%), Gaps = 38/1370 (3%) Strand=Plus/Plus Query 104235 TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACG 104294 ||||| | || || | || || || || ||| || || ||| || || || || Sbjct 1177 TCATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATA 1236 Query 104295 ACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 104353 || |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| Sbjct 1237 ACTTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACT 1295 Query 104354 CCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 104413 |||| ||| ||||||||| ||| ||| | | |||| ||||||||||| ||| | || Sbjct 1296 CCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGG 1355 Query 104414 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 104473 || || | || | | ||| ||||| || || || ||||| |||||||| | Sbjct 1356 ATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 1415 Query 104474 CACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGAT 104533 || |||||| | | | | | | ||| ||| || ||||| ||| || | Sbjct 1416 CATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAAC 1475 Query 104534 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGG 104593 ||| | ||||| ||| |||| || || || ||| || || ||||| | || | ||| Sbjct 1476 GGTTTAATTCCTATGATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGT 1535 Query 104594 CGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGA 104649 | |||| || | | || | || || || |||||||| || |||||| | || Sbjct 1536 AAT-AAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGA 1594 Query 104650 GTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCT 104708 || |||| | | ||||| ||| | ||||| | |||| | ||| | ||| Sbjct 1595 TTTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTC-GTGCAAGAGATTTGTTCC 1653 Query 104709 CCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTC 104768 | ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | Sbjct 1654 CTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACAT 1713 Query 104769 TCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCC 104827 | || | |||| ||| || |||||| | |||| ||||| |||||||| || Sbjct 1714 TATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCT 1772 Query 104828 CTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTG 104887 || || || |||||| |||||||||| | | ||| | ||| | | Sbjct 1773 CTATATACCCGCTACGAGAAAGAAGGTCGTG---GTAAGACTATCAAAGCCCAAAAATTA 1829 Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | | ||| | | ||||||| || ||||||||||| | | | ||||||| || Sbjct 1830 TGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGAT 1889 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || |||||| ||| ||||||||| || || ||||| |||||| || || | || Sbjct 1890 GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGC 1949 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 ||||| | |||| ||| |||||| || ||||| |||||| | || || | Sbjct 1950 TGTGAAATTGTTGAATACTCAGCTCCAGATGAAACAGCTGTTTGTAACTTGGCTTCCGTT 2009 Query 105068 GCTCTCCC------------CAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 105115 || | || | | || |||| |||| |||| | | || Sbjct 2010 GCCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAA 2069 Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 ||| | || ||| || | ||| ||| || || |||||||||| |||||| | ||| Sbjct 2070 AAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAAT 2129 Query 105176 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 | ||||| ||||| || | ||||| ||||||||||| | ||||||| | | ||| Sbjct 2130 TACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGT 2189 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295 ||||| |||||||| || ||||| || | || |||||||||| || ||||| Sbjct 2190 GTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCC 2249 Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355 | ||| | || ||||| || || ||||| ||| | | || || || Sbjct 2250 CGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGT 2309 Query 105356 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 105415 || | || || || |||||||| | ||| || | || ||||| ||||| ||||| Sbjct 2310 GAACTAGCTCAGAAGGACGGTCCATACGGAACTTTCCAAGGATCTCCTGCTTCTCAAGGT 2369 Query 105416 GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGAAGCTCT 105474 | || || ||||||||||||| | | ||| | || | || ||||| | || Sbjct 2370 ATACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CT 2427 Query 105475 CAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT----CATGGCTCCAATG 105529 ||| || | |||| | || | ||| || | || |||| |||||| |||||| Sbjct 2428 TAAGAAAAGATATCATGAAGCATGGTATTAGAAA----TTCCTTGACCATGGCACCAATG 2483 Query 105530 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 2484 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 2533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583250972055520