Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000775555.1_202014-11- 12] 354 sequences; 11,386,071 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq236 203 2e-47 >seq236 Length=230209 Score = 203 bits (224), Expect = 2e-47 Identities = 553/837 (66%), Gaps = 45/837 (5%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 121771 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 121830 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 121831 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 121889 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || | Sbjct 121890 GTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 121949 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 121950 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 122009 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 122010 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAAC 122069 Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864 ||| |||| | || ||||| ||| ||| || || Sbjct 122070 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 122129 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||| || || || | ||| || |||||||| ||||||| || || | Sbjct 122130 TGACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTG 122189 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| Sbjct 122190 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATA 122248 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 122249 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 122307 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 122308 AGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATC 122367 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 122368 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 122427 Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 122428 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 122484 Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276 | | |||||| ||| || |||| || |||| ||||| || |||| ||| Sbjct 122485 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 122544 Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 |||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 122545 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 122601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249641426854