Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000775555.1_202014-11- 12] 354 sequences; 11,386,071 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq191 98.7 1e-15 >seq191 Length=71502 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||||||||||||||| || ||| || ||||| || ||||||| | Sbjct 49305 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 49364 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | |||| || || ||||||||||| || || | || || || || | || Sbjct 49365 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGA 49424 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| || Sbjct 49425 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 49483 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || || || || || || || ||||| ||||| |||||||| Sbjct 49484 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 49531 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | | ||||||||| || | || |||||||| || ||||| |||| | Sbjct 49533 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 49592 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | | || |||||||||||||| || || || | | ||| || || | || Sbjct 49593 AAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGG 49652 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| |||||| || | | | | ||||||| ||||| || Sbjct 49653 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 49712 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 49713 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 49759 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||| | | ||| | ||| || ||| |||||| ||||| |||||||||| | Sbjct 49761 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 49820 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | |||| |||||||||||||| || || || | || || || || | || Sbjct 49821 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 49880 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | ||||||| | ||| |||| | | | ||| | | | || ||| ||||| || Sbjct 49881 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 49939 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| || || | ||||| || || || ||||| Sbjct 49940 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 49987 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||| || | ||| || | | || ||||| |||||||| || || Sbjct 48884 CTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAA 48943 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || |||||||| | || | | ||||||| | ||| |||| | | | ||| Sbjct 48944 AATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGT 49002 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||||| || || | || || || || || || || ||||| | Sbjct 49003 TGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGA 49062 Query 43171 CAAAGATTTGCAT 43183 |||| |||||||| Sbjct 49063 CAAAAATTTGCAT 49075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815069707120