Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F000775555.1_202014-11- 12] 354 sequences; 11,386,071 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq191 145 2e-29 seq179 145 2e-29 seq149 143 5e-29 seq189 138 2e-27 seq161 89.7 1e-12 >seq191 Length=71502 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | || || || || | ||||| || || ||| || || ||| Sbjct 49074 ATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 49133 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| || | ||| ||||||||||| || |||||||||||||| || Sbjct 49134 GACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 49193 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| |||||| |||| || || |||| || || ||||| Sbjct 49194 GGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 49253 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || || || || |||| ||||| | || || ||||| Sbjct 49254 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 49303 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || ||||| || |||| |||||| || ||||||||| Sbjct 49302 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 49361 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || |||| ||| ||||||||||| || ||||| |||||||| || Sbjct 49362 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGA 49421 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || |||| || || ||||| Sbjct 49422 GGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCA 49481 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || || ||||| || | ||| || | ||| || ||||| Sbjct 49482 ACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 49531 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | || || || || | ||||| || || ||| || || ||| Sbjct 49530 ATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 49589 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| || | || ||||| |||||||| || ||||||||||| || Sbjct 49590 GACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGA 49649 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || ||||| || || ||| || | || || ||||| Sbjct 49650 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 49709 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| ||||||||||| || || || |||| ||| |||||||| Sbjct 49710 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 49759 Score = 120 bits (132), Expect = 6e-22 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | || || | |||||| || | ||| || || || |||||| Sbjct 49758 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 49817 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || || | || ||||| |||||||| ||||| |||||||| || Sbjct 49818 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 49877 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || || | ||| || ||||| Sbjct 49878 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 49937 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544 ||||| | || ||||||||||| || || || || | || |||||||| | |||||| Sbjct 49938 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 49997 >seq179 Length=91316 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || ||||||||||| | || || ||| | Sbjct 61995 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 62054 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||||| |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 62055 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 62114 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| || ||||| || || || ||||| || | || | Sbjct 62115 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 62174 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 | ||||| ||||| | ||| ||||| |||||||| || || |||| Sbjct 62175 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 62219 >seq149 Length=179079 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || ||||| || ||||| | ||||| || | Sbjct 135454 GTTCAATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGT 135513 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 135514 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 135573 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| || ||||| || || || ||||| |||| || | Sbjct 135574 GGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAG 135633 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 | ||||| ||||| | ||| ||||| |||||||| || || || | ||| Sbjct 135634 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 135682 >seq189 Length=102599 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || |||| ||||| || || ||| || || || || Sbjct 8685 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8626 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 8625 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8566 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 8565 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8506 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || ||||| || ||||| ||||| || || | || || ||||| || Sbjct 8505 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8455 >seq161 Length=50037 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || |||||||| || || || ||||| ||||| ||| | || ||||| || ||| ||| Sbjct 18667 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 18608 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 || || ||||| | ||||||||||| | ||| || || || ||||| || || || Sbjct 18607 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 18548 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000 || | ||| || | | ||||| || | || |||| | ||||||| | | | ||| Sbjct 18547 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 18488 Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029 ||||| ||| |||||| || || || Sbjct 18487 TGAATCCATCTTAAAGCCCATTCGGCCTT 18459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475534767900