Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001006245.1_202015-05-
12] 213 sequences; 11,761,195 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq152 89.7 8e-13
seq209 84.2 3e-11
>seq152
Length=413389
Score = 89.7 bits (98), Expect = 8e-13
Identities = 310/475 (65%), Gaps = 13/475 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || ||
Sbjct 281561 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 281620
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992
| ||||| ||||| || || | || ||| || | |||||| | || || ||
Sbjct 281621 ATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 281677
Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052
|| ||||| ||| || ||| | || ||| | ||||||||||| ||| | || |||
Sbjct 281678 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 281737
Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
||||| | | || | || || || | || ||| | |||||| | || || ||
Sbjct 281738 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 281796
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||||||| || || ||||||| |||| || || || |||| | || | ||
Sbjct 281797 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 281853
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| | || | ||| | |||| || ||||| || ||||| || || | | || |
Sbjct 281854 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 281913
Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||| | || | | || | | || ||| |||| || ||||||| |
Sbjct 281914 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 281972
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
| || | ||| |||||||| || ||| | |||| || || || || |||||
Sbjct 281973 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 282027
>seq209
Length=23059
Score = 84.2 bits (92), Expect = 3e-11
Identities = 178/258 (69%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092
||| ||| | | || |||| || || ||| || ||||||||||| || || |||||
Sbjct 20179 TTTAGATAAGATGGGATTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATT 20238
Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150
|| |||||||| | || | || || |||| ||||| ||| |||||| | || ||
Sbjct 20239 TCAATGGAGGCATTTTGGTGCTAAATA-CAAGACGTGCGATGAC-GACTATACTGGACAA 20296
Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209
||| ||||||||||| | ||| | || | | || ||||| ||||| ||||| ||
Sbjct 20297 GGTATTGATCAATTG-AAACAGGTTATCCATAAACTAAAGACAAATCCCTACGATAGAAG 20355
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269
||| | ||| | | ||||| || || ||||| || ||||||| | || || || ||
Sbjct 20356 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCA 20415
Query 70270 CTGTTTGGCTCAGTTTTA 70287
||| | ||||| ||
Sbjct 20416 TATTTTTTCACAGTTCTA 20433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057226929880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |