Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001006245.1_202015-05- 12] 213 sequences; 11,761,195 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq152 89.7 8e-13 seq209 84.2 3e-11 >seq152 Length=413389 Score = 89.7 bits (98), Expect = 8e-13 Identities = 310/475 (65%), Gaps = 13/475 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || || Sbjct 281561 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 281620 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992 | ||||| ||||| || || | || ||| || | |||||| | || || || Sbjct 281621 ATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 281677 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 || ||||| ||| || ||| | || ||| | ||||||||||| ||| | || ||| Sbjct 281678 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 281737 Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111 ||||| | | || | || || || | || ||| | |||||| | || || || Sbjct 281738 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 281796 Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171 ||||||||| || || ||||||| |||| || || || |||| | || | || Sbjct 281797 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 281853 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | || | ||| | |||| || ||||| || ||||| || || | | || | Sbjct 281854 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 281913 Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||| | || | | || | | || ||| |||| || ||||||| | Sbjct 281914 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 281972 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | || | ||| |||||||| || ||| | |||| || || || || ||||| Sbjct 281973 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 282027 >seq209 Length=23059 Score = 84.2 bits (92), Expect = 3e-11 Identities = 178/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092 ||| ||| | | || |||| || || ||| || ||||||||||| || || ||||| Sbjct 20179 TTTAGATAAGATGGGATTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATT 20238 Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150 || |||||||| | || | || || |||| ||||| ||| |||||| | || || Sbjct 20239 TCAATGGAGGCATTTTGGTGCTAAATA-CAAGACGTGCGATGAC-GACTATACTGGACAA 20296 Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209 ||| ||||||||||| | ||| | || | | || ||||| ||||| ||||| || Sbjct 20297 GGTATTGATCAATTG-AAACAGGTTATCCATAAACTAAAGACAAATCCCTACGATAGAAG 20355 Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269 ||| | ||| | | ||||| || || ||||| || ||||||| | || || || || Sbjct 20356 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCA 20415 Query 70270 CTGTTTGGCTCAGTTTTA 70287 ||| | ||||| || Sbjct 20416 TATTTTTTCACAGTTCTA 20433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057226929880