Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001006245.1_202015-05- 12] 213 sequences; 11,761,195 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq195 199 1e-45 seq152 197 4e-45 seq209 116 1e-20 >seq195 Length=117639 Score = 199 bits (220), Expect = 1e-45 Identities = 1069/1681 (64%), Gaps = 49/1681 (3%) Strand=Plus/Minus Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423 || || | |||| || ||||| |||||||| ||||| ||||| || ||| | Sbjct 38428 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 38369 Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483 | | || ||||| | | ||||| || |||||| || |||||||||| || | Sbjct 38368 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 38309 Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543 ||||||||| | ||| | || | | | | | || ||||| || | || | Sbjct 38308 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 38251 Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 | || ||||| ||||| | ||||| | | ||| ||||| || | |||| || |||| Sbjct 38250 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 38191 Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 |||| || |||||| | |||||||| || || ||||| ||||| | ||| || | Sbjct 38190 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 38132 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 || | |||||| | |||||||| | |||||| || ||||| | ||| |||| | Sbjct 38131 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 38072 Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777 ||| | |||| ||| || ||| || || || |||| | || ||| || |||| Sbjct 38071 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 38015 Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837 ||| ||||||| || | |||||||| | || || ||||||||||| ||| | Sbjct 38014 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 37955 Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || || || | | | ||||| ||||| ||||| || || ||| | || || Sbjct 37954 GGTGCCTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 37895 Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 | |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| | Sbjct 37894 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 37836 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016 |||| | ||| ||||| || || | | | | | |||| | | |||| || || Sbjct 37835 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTTCGCC-CA 37777 Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075 || || |||| | ||||| |||||||| || | || | ||||| | Sbjct 37776 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 37717 Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 | ||| || ||| | | | |||| |||||| || || ||| | |||| |||||| Sbjct 37716 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 37661 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || | | |||| || ||||| ||||| | ||| | || || || | || ||| | Sbjct 37660 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 37601 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253 ||| | ||||| ||| || | ||||| || || | | ||| ||||| || || | Sbjct 37600 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAACTTATGTTGTGAAATCGT 37542 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||| || | || || || ||||| || ||||| | || || || || || ||||| Sbjct 37541 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCGGC 37482 Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAAC--- 364361 || || | ||||||||| || | | || | | || | || Sbjct 37481 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGA-GAGATTACACG 37423 Query 364362 ------CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 ||| |||| ||| ||| | ||| ||||||||| ||||| ||||| Sbjct 37422 AGATTGCTAAAGTCAT--TACCCACAACTTGAACAGAGTTATCGACCGTAATTACTATCC 37365 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | |||| || || ||| |||||| ||| | || |||| ||||||||| ||||| Sbjct 37364 AGTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGG 37305 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 | || || || ||||||| | | | ||||| || || |||| ||| Sbjct 37304 TTTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCAGAAGAAGCTCAAACTCT 37245 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 ||| || | ||||| ||||| || || ||| | | || || ||||| ||||| Sbjct 37244 AAACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGC 37185 Query 364593 A-AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651 |||| |||| ||| || ||||||| ||| || || || ||| |||| | || | Sbjct 37184 CCAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTAC 37126 Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCA 364711 | || ||| | ||||| | | |||| || | ||| ||||||| || || | Sbjct 37125 AATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGACTGGGAAACCTTAAGAAAGG 37066 Query 364712 ACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTA 364771 || || || ||||| | ||||| | || || || ||||| || || || | Sbjct 37065 ACATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAA 37006 Query 364772 CTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCAC 364831 || | || || || || | || || || |||||||| | || || | || || | Sbjct 37005 CTTCCCAAATTCTTGGTTATAATGAATGTTTCGAACCAGTGACCTCAAACATGTACTCTC 36946 Query 364832 GCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCG 364891 | || || || || || ||||| | || |||||| || || | ||| | || Sbjct 36945 GTCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCG 36886 Query 364892 ACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGC 364951 ||| || | |||| ||| || ||||| | ||| | || | ||||||||| | | Sbjct 36885 ACCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTC 36826 Query 364952 AGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTT 365011 | | | ||| | ||| |||| ||||| | ||||||||||| |||||||| | Sbjct 36825 AAGGCTTACCAAATGTGCCACAAGAATTGAAGGAATTATACAAAACCGTCTGGGAAATCT 36766 Query 365012 C 365012 | Sbjct 36765 C 36765 >seq152 Length=413389 Score = 197 bits (218), Expect = 4e-45 Identities = 698/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 281291 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 281350 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 281351 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 281409 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 281410 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 281469 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 281470 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 281524 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || ||||| | || || ||||||||||| | |||| | | Sbjct 281525 ATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 281582 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 281583 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTA 281642 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 281643 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 281702 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 281703 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 281762 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 281763 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 281822 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 281823 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 281878 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 281879 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 281938 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 281939 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 281994 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 281995 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 282054 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 282055 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 282110 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 282111 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 282170 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 282171 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 282229 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 282230 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 282289 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| Sbjct 282290 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 282345 >seq209 Length=23059 Score = 116 bits (128), Expect = 1e-20 Identities = 338/515 (66%), Gaps = 34/515 (7%) Strand=Plus/Plus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 20143 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGATTCAAAG 20201 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| Sbjct 20202 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 20261 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| || ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 20262 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 20320 Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 || || || | |||| || ||| || | | | || ||||||||||| |||||||| Sbjct 20321 ATCCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 20379 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711 | || || || |||||||| | || ||||| ||| || | | ||||| |||| Sbjct 20380 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 20439 Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748 | | | | | |||| ||||||||| | |||| || || Sbjct 20440 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 20499 Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808 ||| |||||| || | || || || ||||| |||||| || || | | ||| | Sbjct 20500 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 20559 Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868 | || ||| | || | | | || ||||| |||||||| | | || ||||| Sbjct 20560 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 20619 Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903 |||||||| | | ||||||||||||| ||| ||| Sbjct 20620 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 20653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350043066566