Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001006245.1_202015-05- 12] 213 sequences; 11,761,195 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq155 141 8e-29 seq30 140 3e-28 seq141 129 5e-25 seq18 116 3e-21 >seq155 Length=186661 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || || ||||| ||| | Sbjct 178239 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 178180 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || ||||||||||| ||||||||||| || Sbjct 178179 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 178120 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | || | ||||| ||| Sbjct 178119 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 178060 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||| || |||| || || ||| ||||| | || ||| Sbjct 178059 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 178009 >seq30 Length=84656 Score = 140 bits (154), Expect = 3e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || | Sbjct 40086 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 40027 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | | Sbjct 40026 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 39967 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || ||||| || || | ||| | || || |||||||||||||| Sbjct 39966 GATCTTTGCTGGTAAGCAGTTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 39907 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| | || ||||| ||| ||||| | || ||| Sbjct 39906 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 39867 >seq141 Length=82667 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | || Sbjct 51731 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 51672 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||||||||||||||| ||||| || || |||||| Sbjct 51671 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 51612 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || ||| |||| || | | | || ||||||||| Sbjct 51611 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAATGCTGTCTGATTACAAC 51552 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| || || |||||| ||||| Sbjct 51551 ATTCAGAAGGAGTCCACCTTACAT 51528 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||| |||| || || || | || || || || ||| | || Sbjct 51275 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 51216 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| ||||||||||||||||| |||||||| || |||||| Sbjct 51215 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 51156 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || | || || | || | || ||||| ||| Sbjct 51155 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 51096 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | ||||| || ||| ||||| | || ||| Sbjct 51095 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 51048 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || || Sbjct 51503 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 51444 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || |||||||| ||||| || || |||||| Sbjct 51443 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 51384 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| |||| || | ||| | || || |||||| Sbjct 51383 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 51324 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| ||||| | || ||| Sbjct 51323 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 51276 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||| |||| || || || | || || || || ||| | || Sbjct 51047 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 50988 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| || |||||||| || || ||||| || || |||||| Sbjct 50987 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 50928 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || |||| ||| | ||| | || || |||||| Sbjct 50927 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 50868 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| ||||| | || ||| Sbjct 50867 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 50820 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || ||||| || | || || || || ||| | | Sbjct 50819 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 50760 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||||||||||||||||| |||||||| || || || Sbjct 50759 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 50700 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || || |||| ||| | || | || || ||||| Sbjct 50699 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 50640 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || ||||| | || | || ||| | ||| | || ||| Sbjct 50639 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 50592 >seq18 Length=27737 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| | Sbjct 27416 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 27475 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || ||||||||||| ||||| ||||| || |||||| | | Sbjct 27476 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 27535 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||| || || || || || || | || | || || |||||||| ||||| Sbjct 27536 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 27595 Query 22408 GAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||| ||||||| || ||| |||| Sbjct 27596 GAATCCACTTTACATTTGGTCTTGAGATT 27624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726910412345