Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001006245.1_202015-05-
12] 213 sequences; 11,761,195 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq141 156 4e-33
seq155 136 4e-27
seq30 120 3e-22
seq18 105 7e-18
>seq141
Length=82667
Score = 156 bits (172), Expect = 4e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | |
Sbjct 50821 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 50880
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || || || || || ||||||||||| | ||| ||||| || ||
Sbjct 50881 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 50939
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| |||||||| || |||||| ||| | |||||||| ||||| ||
Sbjct 50940 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 50999
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || |||| |||||| ||||||||||||||
Sbjct 51000 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 51047
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | |
Sbjct 51277 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 51336
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || ||
Sbjct 51337 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 51395
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || ||||| || || || | |||||||| ||||| ||
Sbjct 51396 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 51455
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||||||||| ||||| ||||| || || |||||
Sbjct 51456 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 51503
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | || | ||| || || || |||||||| || || | |
Sbjct 51049 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51108
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | | | ||| || || || || || ||||||||||| | || ||||| || ||
Sbjct 51109 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 51167
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| |||||| ||| | |||||||| ||||| ||
Sbjct 51168 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 51227
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || |||| |||||| ||||||||||||||
Sbjct 51228 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 51275
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | |
Sbjct 51505 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 51564
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | | | ||| || ||||| || || ||||| ||||| | || ||||| || ||
Sbjct 51565 AGCATTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 51623
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| || || ||| | || ||||| ||||| ||
Sbjct 51624 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 51683
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || |||||||||||||| ||||| || |||||||| |||||
Sbjct 51684 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 51731
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559
||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | |
Sbjct 50607 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 50665
Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619
| || || || || || ||||||||||| | ||||| || || || || ||||| || |
Sbjct 50666 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 50725
Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679
|||||||||| || || ||| | ||||| || ||||| || || || || || |
Sbjct 50726 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 50785
Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || | || || || |||||||||||
Sbjct 50786 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 50819
>seq155
Length=186661
Score = 136 bits (150), Expect = 4e-27
Identities = 171/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| |
Sbjct 178010 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 178069
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || ||||| ||||| | || || || || ||
Sbjct 178070 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 178128
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 178129 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 178188
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || ||||| || |||||||||||||| || |||||||||||||| |||
Sbjct 178189 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 178240
>seq30
Length=84656
Score = 120 bits (132), Expect = 3e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | |
Sbjct 39868 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 39927
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || | ||| || || ||||| ||||| | || || || || ||
Sbjct 39928 AA-GGTTCTACCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 39986
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| ||
Sbjct 39987 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 40046
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || ||||| || || |||
Sbjct 40047 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 40086
>seq18
Length=27737
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | |||| |||||||||||||| |||||||||||
Sbjct 27633 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 27574
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 27573 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 27514
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 27513 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 27454
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704
|| | ||| ||||| ||||| || ||||| ||||||||
Sbjct 27453 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 27416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397054376760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |