Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029075.1_202015-06- 17] 17 sequences; 12,150,889 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq12 134 1e-26 seq9 93.3 3e-14 >seq12 Length=1078087 Score = 134 bits (148), Expect = 1e-26 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||| ||||||| || || || ||| | || || || | Sbjct 64497 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64438 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || ||| || ||| ||||||||||| | || |||||| Sbjct 64437 GACACTATTGACAACGTCAAAAGTAARATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64378 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||| | |||| ||| ||||| || || || || | | ||| || | ||||||||| Sbjct 64377 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64318 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| ||||| | ||| ||||||||||| || |||| || Sbjct 64317 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGAYTGAGAGGTGG 64271 Score = 102 bits (112), Expect = 7e-17 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | ||||| || || || ||| | || || || Sbjct 64725 ATGCAAATTTTYGTCAAGACNCTNACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64666 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || || ||| || || ||||| | || ||||| Sbjct 64665 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64606 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| || ||||| |||| | ||| || | || || ||| Sbjct 64605 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64546 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || |||||||||||||| |||||||||||||| |||| || Sbjct 64545 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64499 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| ||||| |||||||| || || || |||||| | ||| || || Sbjct 498918 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 498977 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || ||| | | | | || || ||||| || || ||||| | || || Sbjct 498978 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 499037 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| ||||| || |||| || | | ||| || | |||||| Sbjct 499038 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 499097 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 499098 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 499147 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 ||||| ||||| | || | ||| ||||| ||||| || |||| | ||| || | ||| Sbjct 64839 GATCAACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGAC 64780 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| |||||||| ||||| | ||| |||||||||||||| |||| || Sbjct 64779 TACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 64727 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| ||||| || || |||||||| || | ||| || || | Sbjct 65181 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 65122 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || || ||| || || ||||| | || ||||| Sbjct 65121 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 65062 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| ||||| || |||| | ||| || | || |||||| Sbjct 65061 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 65002 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 ||||| |||||||| || || || Sbjct 65001 ATTCAGAAGGAGTCCACCTTACA 64979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | ||||| || || || ||| | || || || Sbjct 64269 ATGCAAATTTTYGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64210 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || || ||| || || ||||| | || || ||| Sbjct 64209 GACACTATTGACAACGTTAAGTCRAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 64150 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| ||||| || || || || | | ||| || |||||||||| Sbjct 64149 CAAAGATTGATYTTTGCCGGTAARCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 64090 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 |||||||||||||| || | ||| | || ||||| ||| | || || || Sbjct 64089 ATTCAAAAGGAGTCCACTCTTCACCTYGTCTTGAGGTTGAGGGGTGGTAA 64040 >seq9 Length=439878 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 ||||||||| ||||| || || || ||||| || | ||| || || || ||| | Sbjct 69150 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 69209 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || || ||||||| || || ||||| | || || || || ||| | Sbjct 69210 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 69269 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| ||||| || |||| |||| | ||| || | ||||||||||||||||| Sbjct 69270 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 69329 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || || |||||| | || ||||||||| |||| || Sbjct 69330 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 69368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876717357713