Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029075.1_202015-06- 17] 17 sequences; 12,150,889 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 190 3e-43 >seq5 Length=576837 Score = 190 bits (210), Expect = 3e-43 Identities = 828/1300 (64%), Gaps = 34/1300 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 300834 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 300775 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 118300 || || ||||| ||||||||| | | || | | ||| | | | | || | || Sbjct 300774 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 300715 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||| || | |||||| || | || | | | | ||||||||||||||| || Sbjct 300714 CTTAAG-GTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 300656 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 300655 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 300596 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 300595 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTYTCAAAGATTTGGATATTTAGCAA 300536 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||| || || |||||||| | | || ||| || || || ||||||||||| Sbjct 300535 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 300476 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| | ||||||| | |||||||||||| || || | || || || || || Sbjct 300475 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 300416 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 300415 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 300356 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 118705 |||| | | | | || ||||| |||| ||| || || || Sbjct 300355 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 300299 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 300298 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 300239 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||| |||||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 300238 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 300179 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| ||||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 300178 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 300119 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 | ||| | | ||| | ||| || | || || |||| |||||| || Sbjct 300118 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 300062 Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002 || || || |||||||| ||||| || | || | | || || | || || ||| Sbjct 300061 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 300005 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 300004 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 299945 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 299944 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 299885 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 119178 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 299884 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 299825 Query 119179 TACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | | |||| |||||| ||||| | |||||| || || ||||||| ||| |||| Sbjct 299824 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 299766 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 | | ||| | || || ||||| || ||| ||| | | | | | | | Sbjct 299765 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTAT 299706 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 |||| || | ||||||||| || || || || || || || ||| | | || Sbjct 299705 GGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGT 299646 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||||| Sbjct 299645 CGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAG 299586 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 | | || ||||| || ||||| | ||||| | ||||| Sbjct 299585 GTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 299546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435068582520