Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029995.1_202015-06- 19] 568 sequences; 11,537,987 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq54 100 2e-16 seq299 95.1 1e-14 >seq54 Length=40702 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||| || || ||||| || |||||||||||| | Sbjct 32079 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 32138 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| ||| || || || || ||||| | |||||||| || | Sbjct 32139 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 32196 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| || || ||| || | | |||| | || | Sbjct 32197 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 32256 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 | |||| |||||| ||||| || || | |||||| || || |||||||| ||| || Sbjct 32257 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 32312 >seq299 Length=118717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || || ||||||| ||| || || |||||||||||||| | Sbjct 65613 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 65672 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | |||| |||| ||| || || || || ||||| | |||||||| || | Sbjct 65673 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 65730 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| ||| ||| ||| || | | |||| | || | Sbjct 65731 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 65790 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 | |||| || || ||||| || |||| |||||| ||||| Sbjct 65791 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 65830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072465091928