Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029995.1_202015-06-
19] 568 sequences; 11,537,987 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq54 107 1e-18
seq299 102 6e-17
seq38 93.3 3e-14
>seq54
Length=40702
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 32097 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 32156
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 32157 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 32216
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 32217 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 32276
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 32277 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 32308
>seq299
Length=118717
Score = 102 bits (112), Expect = 6e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||||||||| | || ||| ||| ||||||||||| || ||
Sbjct 65643 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 65702
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| |||| | ||||||||| || || | |||||||| || ||| | | ||||
Sbjct 65703 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTG 65762
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| | || ||| | |||||| | || || ||||| ||
Sbjct 65763 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTC 65822
Query 18309 TTTACAAAA 18317
|| ||||||
Sbjct 65823 TTGACAAAA 65831
>seq38
Length=15703
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
|||||| || || || |||||||| |||||||| | || ||| ||| |||||| | |||
Sbjct 514 GTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTG 455
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| |||| | |||||| || || || | |||||||| || |||||
Sbjct 454 TTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 395
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
| ||| || | ||| ||||||| | || || | ||| || | || || ||
Sbjct 394 TGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 335
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
|| ||| || || |||||||||||
Sbjct 334 CAGTGTCTTGACGAAAATTTGCAT 311
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| ||||||
Sbjct 291 ACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 232
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| || || ||| | || | ||| ||||||||| || | ||||| ||||| |
Sbjct 231 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 172
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| ||||| | ||| |||||| | || || | ||| || | ||
Sbjct 171 ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 112
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | ||||| || |||||||||||
Sbjct 111 CCTGTTAGAGTTTTGACGAAAATTTGCAT 83
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379341373991160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |