Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001029995.1_202015-06-
19] 568 sequences; 11,537,987 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq299 199 8e-46
seq78 176 9e-39
seq206 172 1e-37
seq38 172 1e-37
seq54 168 1e-36
>seq299
Length=118717
Score = 199 bits (220), Expect = 8e-46
Identities = 176/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||||| ||| |||||||| || || || || ||||
Sbjct 65611 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 65670
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 65671 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 65730
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 65731 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 65790
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 65791 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 65830
>seq78
Length=68480
Score = 176 bits (194), Expect = 9e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || || || || | ||| ||||| || || || || || ||||
Sbjct 29221 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 29162
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 29161 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 29102
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 29101 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 29042
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 29041 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 29002
>seq206
Length=31423
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 206 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 265
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| || | ||
Sbjct 266 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 325
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || ||||| || ||| |||||||| ||||| || || || ||||| |||
Sbjct 326 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 385
Query 82794 TTTACAAATATCTGCATTAT 82813
|| || || |||||||| ||
Sbjct 386 TTGACGAAAATCTGCATAAT 405
Score = 123 bits (136), Expect = 5e-23
Identities = 125/163 (77%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707
|||||||||||||||| || || || |||||||| | || |||||||||||||| || |
Sbjct 12 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 71
Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767
||||||| || || || || | || || || || ||||| || | ||| || || |
Sbjct 72 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 131
Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 132 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 174
>seq38
Length=15703
Score = 172 bits (190), Expect = 1e-37
Identities = 179/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 545 ATCAGTTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGT 486
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| |||||||||||||| || |||||||| | |||||| || |
Sbjct 485 AGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGT 426
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| |||| || || || ||||| || ||| ||
Sbjct 425 CTGGAGGAATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAG 366
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| || || || |||||
Sbjct 365 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 311
Score = 159 bits (176), Expect = 7e-34
Identities = 175/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || | ||| ||||||||||| || || || || || ||||
Sbjct 311 TACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 252
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || |||||||| || | ||| |||||||| ||||
Sbjct 251 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 192
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760
| || ||||| ||||||||||| ||| ||||| || || ||||| || || || |||
Sbjct 191 GGATACCTTCTTTATCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 133
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 132 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 83
>seq54
Length=40702
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| ||||||||||| || || || || || || ||
Sbjct 32078 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 32137
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 32138 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 32197
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 32198 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 32257
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || || ||||| || || || |||||
Sbjct 32258 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 32305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981820054752552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |