Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001051215.1_202015-07- 09] 17 sequences; 12,086,345 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 seq9 84.2 2e-11 >seq12 Length=1062294 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 484456 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 484515 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || ||||| || || || || |||||| | || || Sbjct 484516 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 484575 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | |||||||| || || |||||||||||| | |||| || |||| ||| Sbjct 484576 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 484635 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||||||||||||||||| ||| |||| || |||| |||| || Sbjct 484636 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 484685 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| | || || || || || ||| || ||| | | Sbjct 64492 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 64433 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | |||| |||||| |||||||||||| | || |||||| Sbjct 64432 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 64373 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||| | || ||||| || || ||| | |||||| | ||| || | || ||||| Sbjct 64372 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 64313 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 || ||||||||||||||||||||| ||||||| Sbjct 64312 ATCCAAAAGGAATCTACTCTTCACTTGGTGTT 64281 >seq9 Length=434899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 |||| || ||||| || || ||||| || ||| ||| | | || || | | | Sbjct 69060 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 69119 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 69120 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 69179 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || ||||||||||| | ||| || | || ||||| |||||||| |||| Sbjct 69180 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 69239 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | ||| | ||| | || || |||| |||| || Sbjct 69240 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 69273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796714888038