Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078085.1_202015-07- 15] 361 sequences; 11,356,874 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq21 127 2e-24 >seq21 Length=26429 Score = 127 bits (140), Expect = 2e-24 Identities = 532/831 (64%), Gaps = 23/831 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| |||||||||||| ||||| || || || || | || || || ||| Sbjct 372 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAGATGTTT 431 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-AATAGTATTTATCGCATCCCAATTCCAACAA 16062 ||||| ||||| |||| |||| || | |||||||| | | || || | | ||| Sbjct 432 TCCATGAAATC-GAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCAACCAA 490 Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122 | ||| || || || || || | || || |||||||||||| |||||| |||| || Sbjct 491 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAATCAGCGTTCATACCTAGCAA 550 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 ||| || | || || || | ||| ||| || | || || || ||| || Sbjct 551 AGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAAT 610 Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACAAG 16238 | || | ||| | | | ||||| | || || |||| | || | Sbjct 611 ---TTTTTCAACAATGGCT-GGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATG 666 Query 16239 CAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTG 16298 |||| || ||||| |||||||| |||| || || ||||| ||||| || | ||| | Sbjct 667 CAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGG 726 Query 16299 GCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATAC 16358 |||| | |||| ||||| | ||| || || | |||||| ||||| || || || | || Sbjct 727 GCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACAC 786 Query 16359 CTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcc 16418 |||||| | |||||| ||||| | || ||||| || | || |||| Sbjct 787 CTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATCC 846 Query 16419 attttttagcccaatttgctttttgtttAACACAGTTC----ATGTTCTCTATTGCATTA 16474 || || |||||| | || | | | || | ||| ||| | | || ||||| Sbjct 847 ATCTTAAAGCCCATTCGGCCT----TCTCACCGATTTCTGGGATGGTGTGAATGGCATTG 902 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || || | | ||||||| || || |||||||| || | || || || Sbjct 903 AACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTT 962 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || |||||||| || || || || ||||| || || | | || || | ||| Sbjct 963 TCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATT 1022 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | | | || |||| | |||||||| ||||| || || || ||| || Sbjct 1023 TGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCG 1082 Query 16655 AAAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710 ||||| ||||| | | || ||| ||| | | ||||| || | | || ||| Sbjct 1083 AAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCA 1141 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 |||| | ||| || || ||||| | ||||| | ||||| |||||||| Sbjct 1142 GTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 1192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509912914600