Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078085.1_202015-07- 15] 361 sequences; 11,356,874 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq79 376 3e-99 seq21 196 6e-45 >seq79 Length=138043 Score = 376 bits (416), Expect = 3e-99 Identities = 1343/2075 (65%), Gaps = 51/2075 (2%) Strand=Plus/Minus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 3350 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 3291 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 64952 | | || |||||||||||||||||||||| |||||||| ||| | || Sbjct 3290 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 3231 Query 64953 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 65010 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 3230 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 3174 Query 65011 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 65069 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 3173 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 3115 Query 65070 TCTGGAAGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCT---TG 65123 | ||||| |||| | ||| ||||||| ||| | || ||||| || || | Sbjct 3114 TGTGGAACATTTGGTAAGTCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 3058 Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 65183 || | |||| ||| | | || || | | || | | || || || || Sbjct 3057 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 2998 Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243 || ||||| || || || || | || | ||| ||||| || ||||| | | | Sbjct 2997 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 2938 Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 65303 ||||||| ||||| ||||| | || |||||||| ||||| ||||||| || | Sbjct 2937 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 2878 Query 65304 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 65360 ||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | | Sbjct 2877 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 2821 Query 65361 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 65420 | ||| ||||| |||| | | || |||||| Sbjct 2820 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTGTACCTTGAGAAGCAGGAGATCCTTGG 2761 Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 | || |||||||| || ||||||| ||||||||||||| || || | | | | | Sbjct 2760 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 2701 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||| ||||| ||||| | ||||||| | |||||| ||||||||| || Sbjct 2700 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 2641 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 2640 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 2581 Query 65601 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 65660 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 2580 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 2521 Query 65661 TTTC---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAA 65707 || | |||||| | | ||| | || || |||| || | || || | Sbjct 2520 TTACGAGTGACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 2461 Query 65708 TCG--CTCATCTATTACAAACA-TGTTC--AATGCAACAGATGCCAGATTACAAACGGCT 65762 | |||| || ||| | || | || ||||| || |||| |||||||| || Sbjct 2460 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCA 2401 Query 65763 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGT 65821 |||| | | | | |||| | || ||| ||| ||| || | |||||||| Sbjct 2400 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGAC 2342 Query 65822 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 65881 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || || Sbjct 2341 ACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGT 2282 Query 65882 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 65941 |||||||||| | |||| ||| | ||| | | ||| | | | || || || || Sbjct 2281 ACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGT 2225 Query 65942 TTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 66001 || | |||| | ||||| | ||||| | || |||||||| || || Sbjct 2224 CTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACA 2165 Query 66002 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 66061 || | || |||||| | ||| | | || | ||| || | || | || Sbjct 2164 ATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGAC 2105 Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121 || ||||| || |||||||||||||| ||||| || |||||||| | | | ||| Sbjct 2104 ACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 2045 Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181 ||| || || ||||| ||| ||| | || | | |||||| |||||| ||||| Sbjct 2044 CTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTC 1985 Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 66241 || ||| | ||| | | ||||| | ||| || || ||||| || | || | ||||| Sbjct 1984 CAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGT 1925 Query 66242 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 66301 |||||| |||| | | ||| ||||| | ||| || || ||||| || || || | || Sbjct 1924 GTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAAT 1865 Query 66302 ATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 66361 || ||| ||| |||||| ||| || |||||| || || || || |||| || Sbjct 1864 GTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGA 1805 Query 66362 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 66421 || || || ||| || || || || || || ||||| ||| || ||| ||||| Sbjct 1804 AATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGC 1745 Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481 || | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 1744 AACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGA 1685 Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC 66541 ||||| ||||| ||||| ||| | | || ||||| || | ||| | || ||||| Sbjct 1684 GGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATC 1625 Query 66542 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 66601 | || || |||| |||||| | ||| | | || || || | ||| | | ||| Sbjct 1624 TCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTT 1566 Query 66602 G-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 66659 | ||| ||| | | || || || |||||||||||||||||||||||| |||| | Sbjct 1565 GACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACT 1506 Query 66660 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 66719 ||||| |||| || || | ||| | ||||| | ||||||||| | || | || | | Sbjct 1505 GAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATA 1447 Query 66720 TCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTG 66779 | | | | || || || |||| | || ||| | || |||||| || | Sbjct 1446 TTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTA 1387 Query 66780 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 66839 | | ||| || | |||| | |||| ||||| | |||| ||| |||| ||| || | | Sbjct 1386 TAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAATG 1327 Query 66840 GCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 || |||||||| |||| |||| ||||| ||||| Sbjct 1326 GCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 1292 >seq21 Length=26429 Score = 196 bits (216), Expect = 6e-45 Identities = 588/899 (65%), Gaps = 13/899 (1%) Strand=Plus/Plus Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906 |||| |||||||| || |||||||| ||| || | |||||||| || || || | Sbjct 353 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCT 411 Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 412 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 471 Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 472 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAAT 531 Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 36084 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 532 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 589 Query 36085 AGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 || || || || | ||| | || | || ||| | | ||||| Sbjct 590 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 649 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 650 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 709 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 710 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 769 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC---- 36320 || || || || | ||||| | | |||||||||| ||||| || ||| ||| Sbjct 770 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGG 828 Query 36321 CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380 || || ||| || ||||| || |||||| |||||||||| | || || | Sbjct 829 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 888 Query 36381 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 36440 | | || ||||| || | | | |||| ||| || || | || ||||| |||| Sbjct 889 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 948 Query 36441 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 36500 | | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 949 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 1008 Query 36501 TAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 36560 | ||||| | ||| || ||||| || | || ||| | || |||||||| || || | Sbjct 1009 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 1068 Query 36561 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--G 36617 ||||| || || ||||| || | || || ||| || | ||||| | || Sbjct 1069 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 1128 Query 36618 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 36677 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || | Sbjct 1129 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 1188 Query 36678 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 | || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 1189 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 1247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169829995240