Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078085.1_202015-07- 15] 361 sequences; 11,356,874 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq336 93.3 4e-14 >seq336 Length=43383 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| | ||| ||||| || | | || || ||||| |||||||| || || || | Sbjct 27218 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCT 27159 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||| ||||| ||||||| | |||| | | |||||||||||||| || ||||| Sbjct 27158 ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTC 27099 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || |||||| || | | || | ||||||| | || ||||| | || Sbjct 27098 CTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 27039 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133 | |||||||| |||| ||| || | |||||||||||| | |||||| Sbjct 27038 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 26990 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | || || ||||| ||||||||||| || ||| | ||| Sbjct 27668 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 27609 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || || ||||| | | | || | | ||||||||| ||||| || ||||||||||| Sbjct 27608 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 27549 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | || | ||| |||| | || || || | || | || Sbjct 27548 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27489 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||||||| | |||||| ||||| Sbjct 27488 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609049291960