Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078105.1_202015-07- 15] 218 sequences; 11,492,342 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq21 127 4e-24 seq63 87.8 4e-12 >seq21 Length=30221 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 24780 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 24839 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 ||||| || |||| | ||||| || || ||||| || || || || || ||||| ||| Sbjct 24840 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 24899 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || || |||| | || | || ||||| || | ||||| ||||| Sbjct 24900 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 24959 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 24960 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 24997 >seq63 Length=41648 Score = 87.8 bits (96), Expect = 4e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 || ||||||||||| | ||| || ||| | || ||||| |||||| | | || ||| Sbjct 18702 GGTATGAACGCTGACTTAATGAACCAATACGTTGAGTTCGTCGCCGACAGACTGTTGGTT 18761 Query 230512 GCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570 || | ||| || ||||| ||||| || || |||||||| | || ||||| ||| Sbjct 18762 GCTTTCGGTAACAAGAAATACTACAAGGTCGAA-AACCCCTTCGATTTCATGGAAAACAT 18820 Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630 || | || ||||||||||||||||||||| | || |||||| || | | |||| Sbjct 18821 CTCCTTGGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTTTCTGACTACCAAAAGGCTGG 18880 Query 230631 TGTGATG 230637 ||| ||| Sbjct 18881 TGTTATG 18887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821045365340