Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078105.1_202015-07-
15] 218 sequences; 11,492,342 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 352 3e-92
seq63 199 5e-46
>seq2
Length=62846
Score = 352 bits (390), Expect = 3e-92
Identities = 1338/2075 (64%), Gaps = 51/2075 (2%)
Strand=Plus/Plus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| || |||||||| | ||| ||||| | || || | | ||||||||| || || |
Sbjct 5627 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 5686
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCT 52921
| | || ||||||||||||||||||||||||||||||| ||| | ||
Sbjct 5687 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 5746
Query 52922 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 52979
| || | ||| |||| ||| ||| |||||| || || | | || || ||||
Sbjct 5747 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 5803
Query 52980 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 53038
| || ||||| |||||||||| ||||||||||| ||| || || || || | ||| |||
Sbjct 5804 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 5862
Query 53039 TCTGGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TG 53092
| ||||| |||| || | ||||| || ||| | | ||||| || || |
Sbjct 5863 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 5919
Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152
|| | |||| ||| | | || || | | || | | || || || ||
Sbjct 5920 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 5979
Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212
|| ||||| || || || || | || | ||| ||||| || ||||| | | |
Sbjct 5980 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 6039
Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272
||||||| ||||| ||||| | || |||||||| ||||| ||||||| || |
Sbjct 6040 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 6099
Query 53273 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 53329
||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | |
Sbjct 6100 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 6156
Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 53389
| ||| ||||| ||||| | | || ||||||
Sbjct 6157 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 6216
Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449
| || |||||||| || ||||||| ||||||||||||| || || | | | | |
Sbjct 6217 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 6276
Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509
||||| ||||| ||||| | ||||||| | |||||| ||||||||| ||
Sbjct 6277 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 6336
Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569
||| || || || | ||| || | ||||||||||| | | | || ||||||||||||
Sbjct 6337 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 6396
Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629
|||| || || |||||| || ||| || |||||| ||| || | | | || |
Sbjct 6397 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 6456
Query 53630 TTTC---TGACAATT-----ACTTTGACCACATCCTTC--AGTT---TGAGAAAATCAAA 53676
|| | |||||| | | ||| | || || |||| || | || || |
Sbjct 6457 TTACGAGTGACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 6516
Query 53677 TTGTCCATCTA--TTACAAACA-TGTTC--AATGCAATAGATGCCAGATTACAAACGGCT 53731
||| | || ||| | || | || |||| || |||| |||||||| ||
Sbjct 6517 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCA 6576
Query 53732 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATGGT 53790
|||| | | | | |||| | || ||| ||| ||| || | ||||||||
Sbjct 6577 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATGAC 6635
Query 53791 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGT 53850
||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||
Sbjct 6636 ACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGT 6695
Query 53851 ACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGA 53910
|||||||||| | || | ||| | ||| | | ||| | | || || || ||
Sbjct 6696 ACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGT 6752
Query 53911 TTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAAC 53970
|| | |||| | ||||| | ||||| | ||||||||||| || ||
Sbjct 6753 CTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACA 6812
Query 53971 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 54030
|| | || |||||| | ||| | | || | ||| || | || | ||
Sbjct 6813 ATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGAC 6872
Query 54031 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 54090
|| ||||| || |||||||||||||| ||||| || | |||||| | | | |||
Sbjct 6873 ACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 6932
Query 54091 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 54150
||| || || ||||| ||| ||| | || | | ||||||| |||||| |||||
Sbjct 6933 CTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTC 6992
Query 54151 CAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 54210
|| ||| | || | | ||||| | ||| || || ||||| || | || | |||||
Sbjct 6993 CAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGT 7052
Query 54211 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 54270
|||||| |||| | | ||| ||||| | ||| || || | ||| || || || | ||
Sbjct 7053 GTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAAT 7112
Query 54271 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGA 54330
|| ||| | | |||||| ||| || |||||| || || || || |||| ||
Sbjct 7113 GTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGA 7172
Query 54331 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 54390
|| || || ||| || || || || || || ||||| ||| || ||| |||||
Sbjct 7173 AATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGC 7232
Query 54391 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 54450
|| | ||||| |||||||| | ||| || ||||| || || || |||||
Sbjct 7233 AACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGA 7292
Query 54451 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC 54510
||||| ||||| ||||| ||| | | || ||||| || | ||| | || |||||
Sbjct 7293 GGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATC 7352
Query 54511 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 54570
| || || |||| |||||| | ||| | | || || || | ||| | | |||
Sbjct 7353 TCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTT 7411
Query 54571 G-TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 54628
| ||| ||| | || || || || |||||||||||||||||||||||| |||| |
Sbjct 7412 GACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACT 7471
Query 54629 GAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACA 54688
||||| |||| || || | ||| | ||||| | ||||||||| | || | || | |
Sbjct 7472 GAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATA 7530
Query 54689 TCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748
| | | | || || || |||| | || ||| | || |||||| || ||
Sbjct 7531 TTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATCTA 7590
Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808
| | ||| | | |||| | |||| ||||| | |||| ||| |||| ||| || | |
Sbjct 7591 TAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAATG 7650
Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
|| |||||||| ||||| |||| ||||| |||||
Sbjct 7651 GCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 7685
>seq63
Length=41648
Score = 199 bits (220), Expect = 5e-46
Identities = 590/900 (66%), Gaps = 15/900 (2%)
Strand=Plus/Minus
Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883
|||| |||||||| || |||||||| ||| || | |||||||| || || || |
Sbjct 18893 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCT 18835
Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941
|||| | || || || ||||||||||||||| | || || || || ||| ||||
Sbjct 18834 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 18775
Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001
| | | || || || | || ||| || ||||| ||||| | ||| ||||| |
Sbjct 18774 TGTTA--CCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAA 18717
Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059
||| ||||| |||| | |||||| | || | ||||| | |||| |||||
Sbjct 18716 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 18659
Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119
|| || || || || | ||| | || | || ||| | | |||
Sbjct 18658 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 18599
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
|| |||| ||| ||||| || ||| ||| | ||| |||||||||| || ||||||
Sbjct 18598 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 18539
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
|||||||| || | |||||||| | || | |||||| | ||| || ||||| |||||
Sbjct 18538 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 18479
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299
|| || || || || | ||||| | | |||||||||| |||||||| ||| | |
Sbjct 18478 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 18419
Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
||| ||| || ||||| || |||||| |||||||||| | || ||
Sbjct 18418 GCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 18359
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
|| | || ||||| || | | | |||| ||| || || | || ||||| |||
Sbjct 18358 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATC 18299
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
|| | || |||| || ||||| |||||||| ||||| || ||||||||||
Sbjct 18298 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 18239
Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536
| ||||| | ||| || ||||| | | || ||| | || |||||||| || ||
Sbjct 18238 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 18179
Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593
|||||| || || ||||| || | || || ||| || | ||| ||| ||
Sbjct 18178 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 18119
Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| ||
Sbjct 18118 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 18059
Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713
|| || || || || || | |||||| ||||| || | ||| || |||| ||||
Sbjct 18058 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTAATAGGGAAAAGAACA 17999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593719982108640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |