Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078105.1_202015-07- 15] 218 sequences; 11,492,342 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq63 147 2e-30 >seq63 Length=41648 Score = 147 bits (162), Expect = 2e-30 Identities = 340/507 (67%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 || || ||||||| || | |||||| ||||| ||||| || ||||||| |||| ||| Sbjct 18562 CCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTT 18503 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || ||||| || || | || || || ||||| || || | || |||| | ||||| Sbjct 18502 TTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAG 18443 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCATTTTCTAGCCCATTC 13859 || | ||||| ||| |||||| | || | || |||| |||||| || ||||||||| Sbjct 18442 GCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTC 18384 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTT 13919 | || | || || || | || |||||||| || ||| | ||||| Sbjct 18383 GGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTT 18324 Query 13920 AG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCT 13977 || | ||||| |||| ||||| || | ||| || |||||||||| || ||||| Sbjct 18323 AGGGTCCTTGA--TGTAAGTATCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCA 18266 Query 13978 ATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAAT 14037 || || || ||||| || |||| | || |||| ||| || || | | | || Sbjct 18265 ATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAG 18206 Query 14038 CTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14097 |||| |||||||||||||||||||||| ||| ||| || ||||| || | | | Sbjct 18205 TTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG 18146 Query 14098 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGAA 14154 ||| || || ||| | | ||| | | || ||||| || | ||||||||| Sbjct 18145 GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGAC 18086 Query 14155 AGATCTACTTCATCAACTGTCCAAAAA 14181 | ||| | ||| ||| | ||||| ||| Sbjct 18085 AAATCAATTTCTTCAGCGGTCCAGAAA 18059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587495845520