Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078105.1_202015-07-
15] 218 sequences; 11,492,342 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq37 109 4e-19
seq92 95.1 1e-14
seq46 93.3 3e-14
>seq37
Length=132147
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
|| ||||||||||| || || || || || || ||||| |||||| ||||| ||| |
Sbjct 8424 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8483
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
|| || ||| | | || || || || ||||| ||||| | || |||
Sbjct 8484 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8543
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||||| | || | ||| || || ||||| |||||| || |||| || ||| |||
Sbjct 8544 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8603
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||||| ||||| |||||||| ||||| || || ||||| || |||| ||
Sbjct 8604 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8653
>seq92
Length=82326
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| || ||||| | || || ||||| || ||| | || ||| | |
Sbjct 31095 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 31154
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || ||| |||||| || |||||||| | || ||||||
Sbjct 31155 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 31214
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| || | |||| ||| || || ||| |||||||| || ||| || || ||||||
Sbjct 31215 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 31274
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474
|| ||||| |||||||| || || || || |||||
Sbjct 31275 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAG 31309
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| ||||| || || || ||||| || || ||||| || ||||| ||| | |
Sbjct 30639 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 30698
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | | | | | || || |||||| ||||| ||||| | || ||||||
Sbjct 30699 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 30758
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | || | ||| || || || ||||||| || ||| || |||||||||
Sbjct 30759 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 30818
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| || || || || ||||| || |||| ||
Sbjct 30819 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 30865
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||||||||| || ||| |||| || ||||| || ||| | || ||| | |
Sbjct 30867 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCC 30926
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || || |||||| ||||| ||||| | || ||||||
Sbjct 30927 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 30986
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | || | ||| || || ||| | ||||| || ||| || ||||| |||
Sbjct 30987 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 31046
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| || ||||| ||||| | ||||| || ||||| || |||| ||
Sbjct 31047 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 31093
>seq46
Length=124436
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327
|||||| || || |||||||| |||||||| || ||||| ||| | || || |
Sbjct 77794 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 77735
Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387
|| | | || || ||| ||| ||||| ||||| | || ||| |||||||| |
Sbjct 77734 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 77675
Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447
|| | ||| || || ||||| ||||| || ||| || || |||||||| |||||
Sbjct 77674 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 77615
Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||| || | || ||||| ||||| || |||| ||
Sbjct 77614 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 77576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402328531060544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |