Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001078105.1_202015-07-
15] 218 sequences; 11,492,342 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq92 149 1e-30
seq46 140 8e-28
seq37 138 3e-27
seq60 134 3e-26
>seq92
Length=82326
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| ||||||||||||||||| ||||| || || || |||| || || || ||||||||
Sbjct 31532 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 31473
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| || || || || ||||| | | ||| ||||| ||||||| ||||||||||| ||
Sbjct 31472 TAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 31413
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
|| ||| || ||||| || || |||||||| ||||||||| || || || |||||
Sbjct 31412 AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 31353
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| || || | |||||
Sbjct 31352 ACCTGTCAGTGTCTTGACGAAAATTTGCAT 31323
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| |||||||| || ||||||||||| | || || || || |||||||| ||||| ||
Sbjct 31063 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 31004
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | |||||| || ||||||| ||||||||||| || || || ||
Sbjct 31003 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 30944
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || || ||||| || ||||||||| || || || ||||| || || || |||
Sbjct 30943 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 30884
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 30883 TTGACAAAAATTTGCAT 30867
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| ||||| | || || || || ||||| |||||
Sbjct 30842 GTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 30783
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | |||||| || ||||| | ||||||||||| || || ||
Sbjct 30782 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 30723
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| |||||||| || || |||||| || | || || || || || ||
Sbjct 30722 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 30663
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | ||||||
Sbjct 30662 CAAAGTCTTGACGAAAATCTGCAT 30639
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| | || | ||||||||| || || ||||||||||| || || | | ||| ||
Sbjct 31312 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 31253
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|||||||| || ||||| || || || || | | ||||| || ||||| | |||||
Sbjct 31252 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 31193
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| || || || || ||| ||||| || || ||||| || ||||||||| || ||
Sbjct 31192 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 31133
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || ||||| || || || | |||||
Sbjct 31132 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 31095
>seq46
Length=124436
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 77587 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 77646
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 77647 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 77706
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 77707 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 77766
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 77767 GGTCTTACCAGTCAAAGTCTTGACAAA 77793
>seq37
Length=132147
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| || || ||||||||||| || || | | || || ||
Sbjct 8642 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 8583
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 8582 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8523
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 8522 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 8463
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 8462 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8424
>seq60
Length=71273
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | |||||| || ||||||||||| || || | || || || ||
Sbjct 31490 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 31431
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 31430 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 31371
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || ||||||||||| |||||| || | ||||||
Sbjct 31370 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGATTCAACTTCCAAAGTGAT 31311
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| || ||
Sbjct 31310 GGTCTTACCAGTCAAAGTCTTAACGAA 31284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148762343570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |