Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578265.1_202016-03- 02] 1,513 sequences; 11,329,883 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq693 140 6e-28 seq37 120 6e-22 >seq693 Length=13135 Score = 140 bits (154), Expect = 6e-28 Identities = 235/331 (71%), Gaps = 12/331 (4%) Strand=Plus/Minus Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 |||||||||| || |||| | || ||| | || | || ||| ||| |||||| || Sbjct 1204 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 1146 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 || |||| ||| || | | ||||| | ||||| || |||||| |||| ||||| Sbjct 1145 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 1086 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473 |||||||| |||||| | |||||||||||| |||| | || || | ||| |||||| Sbjct 1085 TACGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 1026 Query 35474 GGAAAGGGTATTGATCAATTG-GCCA--ATATAC-TAAAGACCCTGAGAGA-AAATCCAG 35528 ||| | ||||||||||||||| || ||||| |||| || | ||| |||||| Sbjct 1025 GGACAAGGTATTGATCAATTGAAACAGGTTATACATAAA----CT-AAAGACAAATCCCT 971 Query 35529 ATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTC 35588 | |||||||| || ||||||| || ||||| || ||| || || |||||| | | Sbjct 970 ACGATAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGC 911 Query 35589 CTCCATGCCACATGACTGCTCAATTTTATGT 35619 | |||||||| || | | || || ||||| Sbjct 910 CGCCATGCCATATTTTTTCACAGTTCTATGT 880 >seq37 Length=2607 Score = 120 bits (132), Expect = 6e-22 Identities = 296/444 (67%), Gaps = 15/444 (3%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| | ||||||| |||| || ||| | || || |||||||||||| Sbjct 594 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 535 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||||| |||| ||| | |||| ||||| || || || | ||| ||| Sbjct 534 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 475 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||| | || ||||||||||||| || |||| | |||| || | | Sbjct 474 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 422 Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 | ||| || || ||| |||||||||| || || || |||||||||| || Sbjct 421 ACCAGACCCAGCCATCGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 362 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || | || | || ||| || | || |||||| | || |||| ||| || Sbjct 361 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 302 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271 | |||| || || || || | ||| ||||| | | || || ||||| |||| || Sbjct 301 CGTTGAGTTCGTCGCCGACAGACTGTTGGTCGCTTTCGGTAACAAGAAA--TACTACAAG 244 Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331 || ||||||||| |||||||| || || ||| | | |||||| ||||| || Sbjct 243 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 184 Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355 ||||||||||| | || || ||| Sbjct 183 GAAAAGAGAGTTTCTGACTACCAA 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989564816604915