Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578265.1_202016-03- 02] 1,513 sequences; 11,329,883 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq695 233 2e-56 seq37 230 3e-55 seq975 168 8e-37 >seq695 Length=13064 Score = 233 bits (258), Expect = 2e-56 Identities = 1117/1763 (63%), Gaps = 60/1763 (3%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| ||| || ||||||||||| |||||||| |||| || ||||||||||||||| Sbjct 5915 GTTCTTAAGTAGTACATACCAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTA 5974 Query 47073 GTTAATTTAGA-ATAACTAGGTTCT-GAAATATGAATATTAAGAGATTGACTCTGATCAA 47130 || | ||| || | ||| || | || | || ||| | || ||| |||||| | Sbjct 5975 GTAATCTTACCCATTGAT-GGTGCTTGCAAGAA-AAGATTCAAGGAATGAGACTGATCGA 6032 Query 47131 T--AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188 | | ||| | | |||||| ||||||| | ||| | |||| | || ||||| || Sbjct 6033 TGTAGATGG--CACGATCAGCAGCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGAC 6090 Query 47189 TGTTTTATA-AATTTGTTTAATGTCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTC 47244 ||||| || |||| || ||| |||| ||| | ||| | || ||||||||| || Sbjct 6091 GGTTTTGTATAATTCCTTCAAT-TCTTGTGGCACATTTGGTAAGCCTTGAATAGAACCA- 6148 Query 47245 Cgttttctataatt-----ttgttttttaat-tcatttgaccaaagttttcgttc-agtt 47297 |||| | ||||| |||||| || | |||| ||||| | || | | Sbjct 6149 --TTTTGTGTAATTAGATATTGTTTCATACTATCATC---CCAAATACCCAGGTCGACTA 6203 Query 47298 aat---gtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGG 47354 ||| || | ||| ||| ||||||||| ||| ||||| ||||| || || | ||| Sbjct 6204 AATCACGTAGT--AAATATG--GATTAACAACTTGGAATTCACCAGACAGGACACGACGA 6259 Query 47355 CTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTT 47414 || || || || |||||| | ||||||||| |||| |||||| | |||| Sbjct 6260 GAGTACATGTTTGAGGTCACTGGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTT 6319 Query 47415 GATGCTGTAGGCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTN 47473 || || || ||||| | ||| | || | | | ||||||| |||| ||| || | Sbjct 6320 GAGGCGGTTGGCATTGGTGCCA-TAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTC 6378 Query 47474 NNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTG 47533 || ||||||||| | | |||| | | ||||| | ||| |||| Sbjct 6379 CTTTCTTAAGGTTTCCCAATCCCACATGCCAAATGGTTTAGCGTTCCACATATCGAATTG 6438 Query 47534 AAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGC 47593 | ||| || ||| |||||||| | | | || ||| ||| | | || || Sbjct 6439 TAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGC 6498 Query 47594 GAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAG 47653 | |||||| ||||| | | | || || || ||||| || |||| | ||||||| Sbjct 6499 CAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAG 6558 Query 47654 ATTCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNA-ATGTATCTGCCAATC 47712 | | |||||| |||||||| || || | | ||||| ||||| | Sbjct 6559 AGTTTGAGCTTCTTCCGATTCAAAGGG-TAGACGCAACATCATATAAGTATCGGCCAAAC 6617 Query 47713 CTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATG 47772 | || ||||||| | |||| |||||||| | |||| ||| ||| || || | || Sbjct 6618 CCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAATTTCTAGCCTCGGGAACTG 6677 Query 47773 GATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTC 47832 |||| | || || |||| | | || | |||| || Sbjct 6678 GATAGTAATTACGGTCGATAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGT 6737 Query 47833 TTAATTTATTAAAATCAAA-CTTGTTATTTATAACA--------AACCT------ATTA- 47876 |||| | | |||| | | |||| ||| || || ||||| || Sbjct 6738 GTAATCTCTCGAAATTATAGCTTGCAGTTT-TACCATCTTCTGAAACCTCAACGAATGCT 6796 Query 47877 ---AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATT 47933 || || ||||| |||| |||||| || || |||| || | ||||| | Sbjct 6797 GGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACG 6856 Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993 |||||| ||||| |||| ||||||||||||| || || || || || | || Sbjct 6857 ATTTCACAACATAAATTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 6916 Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053 |||||||||||||| |||| ||| |||||||| || |||||| |||| | || | || Sbjct 6917 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATG 6976 Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113 | | ||| | | | | | ||||| | | | || | | || |||||| | Sbjct 6977 GCATACCACA-ACTTTTGGGCTTTA--ATTGTTTTACCACGACCTTCTCTTTCGTAACGA 7033 Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173 ||||||| | ||||||||||| || |||||| |||||| || || || | || Sbjct 7034 GTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGGC 7093 Query 48174 CACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAA 48233 | | ||| | |||| | |||| | || || | |||| || | ||| || ||||| Sbjct 7094 GAAAACAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCAT 7153 Query 48234 AGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCA 48293 ||||| || ||||| || | | | |||||| || ||| | || | | || Sbjct 7154 AGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCG 7213 Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353 | |||||| | ||||| ||||||||||| || || | | || | |||| |||| Sbjct 7214 ACAAAGTCGAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTC 7273 Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413 || ||||| || || || | ||| | ||||||||| || |||| | | ||| || | Sbjct 7274 TTGTTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATC 7333 Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473 | || ||||| |||| ||||| || | |||||| || | | | || || | Sbjct 7334 AACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTG 7393 Query 48474 ATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCA 48533 || || ||| | ||||||||| |||| || || | |||||| ||| | |||||| Sbjct 7394 ATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCA 7453 Query 48534 TAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGA 48593 ||||| ||||| ||| ||||| |||| | || ||||| ||||||||| ||| Sbjct 7454 TAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGA 7513 Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653 || || || | || ||||| ||||| || || ||| | || || | || | | Sbjct 7514 TGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATC 7573 Query 48654 AATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGC 48713 || ||||| || | | ||||| || ||||| | ||| ||||||| | |||||| Sbjct 7574 AAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGC 7633 Query 48714 ATTAACATATATTGAGGTCTTTC 48736 |||| || || ||||| | ||| Sbjct 7634 ATTACCAAATGCTGAGGACGTTC 7656 >seq37 Length=2607 Score = 230 bits (254), Expect = 3e-55 Identities = 608/916 (66%), Gaps = 17/916 (2%) Strand=Plus/Plus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | |||||| ||||| ||||| ||||| || || | || || || | Sbjct 158 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 217 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| ||||| || || |||| || || || ||| ||| || || | | | Sbjct 218 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCGACCAAC 277 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || || || || | || ||| |||||| | ||| ||||| |||| || Sbjct 278 AGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAA 337 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTT-GTTCTATATTTACTGCCTCTGATATAA 18907 ||| |||| || || ||||| | |||| |||| || | || ||||| | | || Sbjct 338 GCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAA 395 Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 | | |||| | || | || || | ||| |||| ||| ||||||| Sbjct 396 TTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATGCAA 455 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 | || || | || |||||||||| |||||||| || ||||| |||||||| |||| Sbjct 456 AGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGGCA 515 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 ||| ||||| ||||| |||||||| || || ||||| || || || || || | ||||| Sbjct 516 TCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACCTT 575 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCAT 19146 | | | ||||| |||||||||||||| ||| ||| | || ||| | ||||||||| Sbjct 576 CAATGGAGGCAAAGGCAACTAGTCTTTCACCA-AACAAGGCGTCAGCGTCTTGAATCCAT 634 Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206 | | ||||| || ||||||| | ||| || || | || | ||| || | | Sbjct 635 CTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGTGTGAATGGCATTGAACA-A 693 Query 19207 TACATACGCTCATCTGTA---TCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263 | || | || ||| || || || | || | ||| ||||| || ||| |||| Sbjct 694 GA-ATTCACT-TTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTTCA 751 Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323 || ||||||||||| || || || || ||||| |||| |||| |||| || || Sbjct 752 GAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTTGG 811 Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383 ||||| | | || |||| ||||| ||||||||||| || || ||| ||| || ||| Sbjct 812 ACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGAAA 871 Query 19384 AATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATC 19439 || || | || ||| ||| | | || | | ||| || | ||||| || Sbjct 872 AAGGCAAGAACTCTGGAAATGAAAAATCTCTCGT-TCTCGTTCATTCTGTTGTTCCAGTC 930 Query 19440 ATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTT 19499 || ||||| ||||| ||||| | ||||||| | ||||| |||||||| || || || Sbjct 931 ATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCACGCTT 990 Query 19500 ATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 || | ||| || ||| | || | ||||| || | |||| ||| | || | ||| Sbjct 991 GTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACAGTTCTCTCCTTGTCTTC 1050 Query 19560 TTTAAGAATAGGTTCC 19575 || | | ||||||| Sbjct 1051 ATTCAACAAAGGTTCC 1066 >seq975 Length=7693 Score = 168 bits (186), Expect = 8e-37 Identities = 808/1270 (64%), Gaps = 43/1270 (3%) Strand=Plus/Minus Query 47958 TTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATA 48017 ||||| ||| || |||| |||||| ||||||| || |||||||||| | Sbjct 2179 TTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACG 2120 Query 48018 AAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTT 48077 |||||||| |||||||| | |||| ||| | || || | ||| | | | | | |||| Sbjct 2119 AAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATA-ATTTTTGGGCTTT 2061 Query 48078 ATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCC 48137 | || || | | || | ||||| ||||||| |||||| || || Sbjct 2060 G--ATAGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCA 2003 Query 48138 CCATACACATTATCT-AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATC 48196 || || ||| | || || |||||| | | ||| | | |||| ||| | ||| Sbjct 2002 CCGTA-ACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATT 1944 Query 48197 ATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGT 48256 | || || | |||| || | ||| || ||||| ||||| || ||||| || | Sbjct 1943 TTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGC 1884 Query 48257 TCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATG 48316 | | ||| || || || ||| | ||| |||| ||| || | |||||||||||| Sbjct 1883 ACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATG 1824 Query 48317 CCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATA 48376 ||||||||| | || | || | |||| |||| ||||||||| || || || | ||| Sbjct 1823 CCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATA 1764 Query 48377 TCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGT 48436 | |||||| || || |||| | | ||| || | | ||| || || |||| || || Sbjct 1763 ACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGT 1704 Query 48437 TCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGC 48496 || | ||| ||| ||| | | | || ||| || | ||| |||||||| || Sbjct 1703 ACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGC 1644 Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556 |||| || || | |||||| || | ||| || ||||| || || ||| || || Sbjct 1643 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 1584 Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616 |||| | | |||||| |||||||| || | ||| || | ||| || || Sbjct 1583 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAA 1524 Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676 |||||||| || ||| |||| |||| || | ||| ||||| ||||| | | ||| Sbjct 1523 CGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGC 1464 Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 || ||||| | || || |||| | || | ||| | | || ||| || | ||| Sbjct 1463 CTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTC 1404 Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 | | || || ||| | | | ||| || |||||| ||||||||||||||||| Sbjct 1403 GGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATA 1344 Query 48797 GTTGTA-TGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTT-TA 48854 |||| |||||| || | |||| | ||||| || || | | | ||||| | || | Sbjct 1343 ACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCA 1285 Query 48855 T----ATACT----ACATCCATTACATTTTTTGATA-------TA-----------ATTG 48888 | ||| | |||| ||| | | | || | || |||| Sbjct 1284 TGACAATATTGTAGACAT-CATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTG 1226 Query 48889 A-TTCCTTGTAAAGATCTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGA 48947 | | | ||||||||||| ||||| | | |||| |||| | |||| |||||| | | Sbjct 1225 ACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAA 1166 Query 48948 TTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA 49007 ||||| || | ||||| || |||| | || ||||||||||||| || || ||| || Sbjct 1165 TTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGT-CATATA 1107 Query 49008 CTAG-ATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCC 49066 | || |||| || ||||| | |||| ||| | || || |||||| ||| | || Sbjct 1106 AGCGCATGTTTCAGCGGCTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATAGACACC 1047 Query 49067 TTGAATAACTTTCATT--GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAA 49124 ||| | | | || | | || || | || ||||| | ||| | ||||| Sbjct 1046 AGAAATGA--TACGTTGGGTGACCTTAACGGCGTCGATATGTTTTGGATCTAAACCATAG 989 Query 49125 CATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCA 49184 ||||| | ||| | || ||||| ||||| || | | |||||||||||||| Sbjct 988 CATAAGCGTGATATACGAGCGGTAATCTTATCGAATTGGACAGGTTCTTTACGACCGTCT 929 Query 49185 CGTTTTATAA 49194 | |||||||| Sbjct 928 C-TTTTATAA 920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562098169117320