Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578265.1_202016-03- 02] 1,513 sequences; 11,329,883 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq693 107 2e-18 >seq693 Length=13135 Score = 107 bits (118), Expect = 2e-18 Identities = 208/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 172454 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 172512 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 1176 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 1118 Query 172513 CTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGG 172572 || || |||| ||| ||| | || || |||| |||||||||||||| ||| || | Sbjct 1117 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATTTCAATGGAGGCATTTTGGTG 1058 Query 172573 CTCAATATATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 172631 || |||| | ||| || ||| || || || |||||||| | || ||||| | || Sbjct 1057 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 999 Query 172632 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 172691 ||| ||| || | | || || | |||||| || | || | ||||| Sbjct 998 GTTATACATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 939 Query 172692 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTC 172751 | || | |||| ||||||| | | || || ||||||| ||| |||| || |||||| Sbjct 938 CCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTC 879 Query 172752 AG 172753 || Sbjct 878 AG 877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632477638040440