Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578265.1_202016-03- 02] 1,513 sequences; 11,329,883 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq975 120 7e-22 seq695 116 9e-21 seq1275 95.1 3e-14 >seq975 Length=7693 Score = 120 bits (132), Expect = 7e-22 Identities = 552/866 (64%), Gaps = 20/866 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||||||||| |||||| | |||||| |||||||||| | |||| || | | Sbjct 1344 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 1403 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| ||||| | || | | || || | || || || || ||||| | Sbjct 1404 GAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAG 1463 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 |||| | | ||| ||| | | | | ||| | || ||| || |||| || Sbjct 1464 GCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCTCCAACG 1523 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542 | || || || || ||| | ||| || | ||||| |||||| | | || || Sbjct 1524 TTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTTGCCATGAA 1582 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 || || ||||| || || ||||| || | | || ||| |||| | ||||| |||| Sbjct 1583 GGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAAC 1642 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| || |||||| | || | ||| | ||||| |||| || | | || || Sbjct 1643 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 1702 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || ||| |||| | || | |||| ||| | | || ||||| ||||||| Sbjct 1703 TACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCG 1762 Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779 ||||| | || |||||||| | || ||| | ||||| | || || ||||| || Sbjct 1763 TTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATG 1822 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838 |||| | ||||||||||| || | || || | || || || || | |||| ||| Sbjct 1823 GCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAAT 1879 Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 | ||| | ||||| || ||| | |||||| | ||| | |||||||| ||||| | Sbjct 1880 TCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGA 1939 Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGATGTAT 110955 ||||||||| | ||| | | | | ||| |||| |||||||| || ||| | Sbjct 1940 AGAAAATGGGACCTGGACATTATTCTCTCCAACATC-AGCTCCTGGTTTAAGCGATTGTT 1998 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG-CAA 111013 | || | |||||||| | || || || || |||||||| | | | | | | Sbjct 1999 ACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAAGACTA 2058 Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073 ||| ||| ||| || | |||| || | ||| | ||| ||||||||| || Sbjct 2059 TCAA-----AGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTAC 2113 Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133 |||| || | || || ||| | ||| | ||||||||||||| || ||||| Sbjct 2114 ACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGT 2173 Query 111134 AATTAAGTCTAGTAATTTGTGCTGTG 111159 || ||||| || || ||||||| Sbjct 2174 CATCAAGTCATCAAACTTATGCTGTG 2199 >seq695 Length=13064 Score = 116 bits (128), Expect = 9e-21 Identities = 267/399 (67%), Gaps = 5/399 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569 ||| || |||| || |||||| | | || || ||||| ||||| |||||||||||||| Sbjct 7509 CAAATGTCTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGA 7451 Query 110570 TGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCA 110629 | || | |||||| |||| | ||||| |||| | || || ||||| |||| | | Sbjct 7450 TACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAA 7391 Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGT 110689 | || || || | ||| | ||||||| | || ||| |||||| || | | Sbjct 7390 CAACATCCGTTCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGAT 7331 Query 110690 TCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAG 110746 ||| ||| | | || ||||| | ||||| |||||| | || |||||| ||||| Sbjct 7330 TCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAG 7271 Query 110747 AAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGA 110806 | ||| | || || | | | || || |||||| ||||||| || || || | || Sbjct 7270 ACCTGGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGA 7211 Query 110807 ACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTG 110866 | | |||| || || |||||| | ||| | ||||| || ||| | || Sbjct 7210 TATCAGAAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATG 7151 Query 110867 GATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905 ||| | ||| | |||||||||||||||||||| |||| Sbjct 7150 GATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGG 7112 >seq1275 Length=41410 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943 ||||||| |||| |||| || | ||||||||||| |||||||| || | || || Sbjct 1658 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 1715 Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003 ||||| || ||| | || | || |||| | || | || ||||||||||||| Sbjct 1716 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 1775 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058 |||| |||||||| ||||||| || ||||| |||||| ||||||| ||| || Sbjct 1776 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 1830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186789793262993