Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03-
02] 1,162 sequences; 11,665,474 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq13 147 2e-30
>seq13
Length=26319
Score = 147 bits (162), Expect = 2e-30
Identities = 383/577 (66%), Gaps = 43/577 (7%)
Strand=Plus/Plus
Query 101792 GCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAA 101851
|||||||||||||| ||||| |||||||||||| || | ||| |||| | || |||
Sbjct 2942 GCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAA 3001
Query 101852 AG-----------------CTT-TCCATC---------ACAGACATAAAATTGACTTAAT 101884
|| ||| ||| || || |||||| || || ||
Sbjct 3002 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 3061
Query 101885 ACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAAC 101944
| ||| || |||||||| ||||||| || || | ||||| |||| ||| |
Sbjct 3062 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 3121
Query 101945 ATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAAC 102003
|| |||||||| |||||| ||||| |||| ||| ||| | |||||| ||||| ||||
Sbjct 3122 ATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAAT 3180
Query 102004 TCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACT 102062
|||| ||| |||| ||| | ||| | || |||| || || ||||||||||| |
Sbjct 3181 ACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTAGCACCAAAATGCCTCCATT 3239
Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122
|||||||||| || || || ||||||||| | | || || | || || | |||||||
Sbjct 3240 GAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAATCCCATCTTATCTA 3299
Query 102123 AAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC-AGCT--GCTGATAGCTCTT 102179
|| || | ||||||||| | |||||||| | || || ||| | |||| ||
Sbjct 3300 AATATTCACGAGATCCATTACCGTCCCAAATCTTAACACCTTGCTCAGACAATAG--GTT 3357
Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239
|| ||| ||| || | ||||||||| ||||| | | |||||| ||| |
Sbjct 3358 AGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGTATGATACCTCTAGTAAAGA 3416
Query 102240 CTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAACCTAGACT---GTG 102293
| |||| || |||| ||||| || |||| ||||||||| | || |||
Sbjct 3417 CCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAACTAAAACGCAGCTGGGGTG 3476
Query 102294 TTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330
| |||||| ||||| || ||||| |||||||| ||
Sbjct 3477 GTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 3513
Score = 102 bits (112), Expect = 6e-17
Identities = 198/290 (68%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592
||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || |||
Sbjct 2635 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 2694
Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651
|| ||| ||| ||||||||| | ||| | || || | ||| | || || |
Sbjct 2695 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 2753
Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711
|||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || |
Sbjct 2754 GTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 2813
Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771
|||| || | |||||| || ||||| || ||| | | | || | ||||||||| |
Sbjct 2814 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 2873
Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821
||| || | || ||| |||||||||||||| ||||| |||||||||
Sbjct 2874 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATA 2923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361246084005662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |