Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03- 02] 1,162 sequences; 11,665,474 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq13 147 2e-30 >seq13 Length=26319 Score = 147 bits (162), Expect = 2e-30 Identities = 383/577 (66%), Gaps = 43/577 (7%) Strand=Plus/Plus Query 101792 GCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAA 101851 |||||||||||||| ||||| |||||||||||| || | ||| |||| | || ||| Sbjct 2942 GCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAA 3001 Query 101852 AG-----------------CTT-TCCATC---------ACAGACATAAAATTGACTTAAT 101884 || ||| ||| || || |||||| || || || Sbjct 3002 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 3061 Query 101885 ACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAAC 101944 | ||| || |||||||| ||||||| || || | ||||| |||| ||| | Sbjct 3062 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 3121 Query 101945 ATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAAC 102003 || |||||||| |||||| ||||| |||| ||| ||| | |||||| ||||| |||| Sbjct 3122 ATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAAT 3180 Query 102004 TCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACT 102062 |||| ||| |||| ||| | ||| | || |||| || || ||||||||||| | Sbjct 3181 ACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTAGCACCAAAATGCCTCCATT 3239 Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122 |||||||||| || || || ||||||||| | | || || | || || | ||||||| Sbjct 3240 GAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAATCCCATCTTATCTA 3299 Query 102123 AAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC-AGCT--GCTGATAGCTCTT 102179 || || | ||||||||| | |||||||| | || || ||| | |||| || Sbjct 3300 AATATTCACGAGATCCATTACCGTCCCAAATCTTAACACCTTGCTCAGACAATAG--GTT 3357 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 || ||| ||| || | ||||||||| ||||| | | |||||| ||| | Sbjct 3358 AGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGTATGATACCTCTAGTAAAGA 3416 Query 102240 CTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAACCTAGACT---GTG 102293 | |||| || |||| ||||| || |||| ||||||||| | || ||| Sbjct 3417 CCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAACTAAAACGCAGCTGGGGTG 3476 Query 102294 TTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 | |||||| ||||| || ||||| |||||||| || Sbjct 3477 GTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 3513 Score = 102 bits (112), Expect = 6e-17 Identities = 198/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 2635 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 2694 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 2695 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 2753 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || | Sbjct 2754 GTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 2813 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 2814 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 2873 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 ||| || | || ||| |||||||||||||| ||||| ||||||||| Sbjct 2874 TAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATA 2923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361246084005662