Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03- 02] 1,162 sequences; 11,665,474 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq298 197 4e-45 seq281 194 4e-44 seq13 118 3e-21 >seq298 Length=16786 Score = 197 bits (218), Expect = 4e-45 Identities = 1018/1597 (64%), Gaps = 49/1597 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || |||||| || |||||||||| || | ||||||||| | ||| | || Sbjct 11008 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 10949 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 | | | | | || ||||| || | || | | || ||||| ||||| | |||| Sbjct 10948 TCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAAGATACTTCACTCACGCTTCCCCAA 10891 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATG 363624 | | | ||| ||||| || | |||| || |||||||| || |||||| | ||| Sbjct 10890 CTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATG 10832 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || || ||||| ||||| | ||| || | || | |||||| | |||||||| Sbjct 10831 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 10772 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 | |||||| || ||||| | ||| |||| | ||| | |||| ||| || || Sbjct 10771 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTC-TTATAT-CG 10714 Query 363744 C-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 | || || || |||| | || ||| || |||| ||| ||||||| || | |||||| Sbjct 10713 CTGGTACCAACGG-TACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACT 10655 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || | || || ||||||||||| ||| | || || || || | | | ||| Sbjct 10654 GCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAG 10595 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACG-GGAAAAGAGGA 363920 || ||||| ||||| || || ||| | || || | |||||||| || || || || Sbjct 10594 CCATGGCATGCAGATATCTTCGACTTTGTCGATATCAG-AAAAACACATGGTAAGGAAGA 10536 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | | |||||| | ||| ||||| ||| || ||| | |||| | ||| ||||| || || Sbjct 10535 AATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGT 10476 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC-AGGTCTTTCCGATG 364039 | | | | | |||| | | |||| || || || || |||| | |||| Sbjct 10475 TCAAGAGGATGGGCCTTGGACTTTGTTTTCGCC-CAGTGCTGCCCCAGGTTTAGATGATG 10417 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC-TCGT 364098 | |||||||| || | || | ||||| || ||| || ||| | | | || Sbjct 10416 TGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAA----AGAGAAGGTCGTGGT 10361 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || |||||| || || ||| | |||| |||||| || | | |||| || ||||| Sbjct 10360 AAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAGCACAGACAGAAACAGGT 10301 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 ||||| | ||| | || || || | || ||| | ||| | ||||| ||| || | ||| Sbjct 10300 ACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGGT 10241 Query 364219 ACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || || || | | || ||||| || || | ||||| || | || || || || Sbjct 10240 ACTAT-CAAATCATCTAATTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAAC 10182 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---------AAAAGATGG 364328 ||| || ||||| | || || || || || || || || || | ||||||| Sbjct 10181 TGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGTTGAGGTTTCAGAAGATGG 10122 Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAAC---------CTA---TCATGCTACTTG 364376 || || | | || | | || | || ||| |||| |||| Sbjct 10121 TAAAACTGCAAGCTATAATTTCGA-GAGATTACACGAGATTGCTAAAGTCAT--TACTCA 10065 Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 ||| | ||| ||||||||| ||||| |||||| |||| || || ||| || Sbjct 10064 CAACTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAGGCTAGAAATTCAAA 10005 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 |||| ||| | || |||| ||||||||| ||||| | || || || ||||||| | Sbjct 10004 TATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGTTTGGCCGATACTTATATGATGTT 9945 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | | ||||| ||| || |||| |||||| || | ||||| ||||| || Sbjct 9944 GCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCTAAACAAACAAATCTTCGAAACTAT 9885 Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA-AAAACCAAGGGAAAGTACTCTA 364615 || ||| | | || || ||||| ||||| |||| |||| ||| || |||| Sbjct 9884 TTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAA-TATTCTA 9826 Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675 ||| ||| || || || ||| |||| | || || || ||| | ||||| | | | Sbjct 9825 CTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTACAATTCGATATGTGGAACGCTAAAC 9766 Query 364676 CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCA 364735 ||| || | ||| | ||||| || || | || || || ||||| | | Sbjct 9765 CATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGGACATTGTTAAACATGGGTTAAGAA 9706 Query 364736 ACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 |||| | || || || ||||| || || || ||| | || || || || | || | Sbjct 9705 ACTCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTTGGTTATAATG 9646 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 | ||||||||||| | || || | || || || || || || || || ||||| | Sbjct 9645 AATGCTTCGAACCAGTGACCTCAAACATGTACTCTCGTCGTGTCCTGTCTGGTGAATTCC 9586 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 || |||||| || || | ||| | ||||| || | |||| ||| || | Sbjct 9585 AAGTTGTTAATCCATATTTACTACGTGATTTAGTCGACCTGGGTATTTGGGATGATAGTA 9526 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975 |||| | ||| | || | ||||||||| | || | | ||| | ||| ||| Sbjct 9525 TGAAACAATATCTAATTACACAAAATGGTTCTATTCAAGGCTTACCAAATGTGCCACAAG 9466 Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012 | ||||| | ||||||||||| |||||||| || Sbjct 9465 AATTGAAGGAATTATACAAAACCGTCTGGGAAATCTC 9429 >seq281 Length=17638 Score = 194 bits (214), Expect = 4e-44 Identities = 697/1076 (65%), Gaps = 57/1076 (5%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| | ||||| ||| |||||| || |||| || || || ||||| ||| Sbjct 11223 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 11282 Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 || |||||| | |||||||| || || |||||||| || | ||||| | ||| | Sbjct 11283 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 11341 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | |||||||| | ||| || || |||||| || ||||| || ||||| | Sbjct 11342 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 11401 Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780 | || | ||||||| || ||| || |||| | || || | |||| ||| Sbjct 11402 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 11456 Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838 ||||||| || | || || || | || || ||||||||||| | |||| | | Sbjct 11457 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 11514 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | |||||||| | || || || || ||||| ||||| ||||| ||| |||| | Sbjct 11515 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 11574 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 |||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| || Sbjct 11575 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 11634 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018 |||| | ||| |||||||| || || | | | || ||| || | || | ||| Sbjct 11635 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 11694 Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078 | ||| ||| | |||| | |||||||| | || |||||||| || | Sbjct 11695 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 11754 Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 | || ||| | | | ||||||| || || || || |||||| | |||| || Sbjct 11755 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 11810 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || | || | ||| || || ||||| | | | ||||| ||| | || ||| | || Sbjct 11811 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 11870 Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 || || || | || | ||| ||| ||| || ||| |||| || ||| | Sbjct 11871 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 11926 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | ||||| || || ||||| || |||||| | || || | || | || || Sbjct 11927 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 11986 Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCAC---CAGCATC-------TTT 364351 | ||| || | |||||| |||| |||| || | || | Sbjct 11987 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 12042 Query 364352 ATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 |||| | | | || |||| | ||| | ||| || || || ||||| || | Sbjct 12043 ATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 12102 Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470 | || |||| |||| || |||||| | ||| | || |||| | | ||||| || Sbjct 12103 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 12161 Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530 || ||||||||| ||| ||| || | || |||||||||| || || ||| | Sbjct 12162 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 12221 Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586 ||||||| | ||||||||||| || ||| |||| | ||| ||||| ||||| Sbjct 12222 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 12277 >seq13 Length=26319 Score = 118 bits (130), Expect = 3e-21 Identities = 209/297 (70%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477 ||| || |||||||| || |||||||| ||||| | | ||||| || ||| || | Sbjct 3337 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGATTCAAAG 3279 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | ||| ||| ||||| || || ||||| |||||||||||| | || |||||||| Sbjct 3278 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 3219 Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||| || ||| | ||| ||| | ||| || | ||||||||| | | || Sbjct 3218 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 3160 Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || || | |||| || ||| || | | | || ||||||||||| |||||||| Sbjct 3159 ATTCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 3101 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 | || || || |||||||| | || ||||| ||| || | | ||||| ||||| Sbjct 3100 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGT 3044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303334195508684