Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03-
02] 1,162 sequences; 11,665,474 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq306 141 8e-29
seq365 136 3e-27
seq652 134 1e-26
seq335 116 3e-21
>seq306
Length=16601
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || |||||||||||||| || | || || ||||| ||| |
Sbjct 8941 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8882
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| || || ||||||||||| ||||||||||| ||
Sbjct 8881 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8822
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | || | ||||| |||
Sbjct 8821 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8762
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| || |||| || || ||| ||||| | || |||
Sbjct 8761 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 8711
>seq365
Length=14435
Score = 136 bits (150), Expect = 3e-27
Identities = 162/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || |
Sbjct 11582 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 11523
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | |
Sbjct 11522 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 11463
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | ||| | || || ||||||||||||||
Sbjct 11462 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 11403
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| | || ||||| ||| ||||| | || |||
Sbjct 11402 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 11363
>seq652
Length=34184
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | ||
Sbjct 12267 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 12208
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || ||||||||||||||||| ||||| || || ||||||
Sbjct 12207 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 12148
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || ||| |||| || | || | || |||||||||
Sbjct 12147 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 12088
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
||||| || || |||||| |||||
Sbjct 12087 ATTCAGAAGGAGTCCACCTTACAT 12064
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || ||
Sbjct 12039 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 11980
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || ||||| || |||||||| ||||| || || ||||||
Sbjct 11979 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 11920
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| |||| || | ||| | || || ||||||
Sbjct 11919 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 11860
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || || ||| ||||| | || |||
Sbjct 11859 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 11812
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || || | || ||||| || | || || || || ||| | |
Sbjct 11811 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 11752
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || ||||||||||||||||| |||||||| || || ||
Sbjct 11751 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 11692
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || || |||| ||| | || | || || |||||
Sbjct 11691 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 11632
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || ||||| | || | || ||| | ||| | || |||
Sbjct 11631 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 11584
>seq335
Length=15431
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287
|| ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 889 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 830
Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347
||| || |||| || || ||||||||||| ||||| ||||| || |||||| | |
Sbjct 829 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 770
Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 769 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 710
Query 22408 GAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||| ||||||| || ||| ||||
Sbjct 709 GAATCCACTTTACATTTGGTCTTGAGATT 681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419722055864530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |