Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578275.1_202016-03- 02] 1,162 sequences; 11,665,474 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq298 116 9e-21 seq259 95.1 3e-14 >seq298 Length=16786 Score = 116 bits (128), Expect = 9e-21 Identities = 267/399 (67%), Gaps = 5/399 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569 ||| || |||| || |||||| | | || || ||||| ||||| |||||||||||||| Sbjct 10861 CAAATGTCTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGA 10803 Query 110570 TGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCA 110629 | || | |||||| |||| | ||||| |||| | || || ||||| |||| | | Sbjct 10802 TACTTTGAAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAA 10743 Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGT 110689 | || || || | ||| | ||||||| | || ||| |||||| || | | Sbjct 10742 CAACATCCGTTCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGAT 10683 Query 110690 TCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAG 110746 ||| ||| | | || ||||| | ||||| |||||| | || |||||| ||||| Sbjct 10682 TCCTATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAG 10623 Query 110747 AAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGA 110806 | ||| | || || | | | || || |||||| ||||||| || || || | || Sbjct 10622 ACCTGGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGA 10563 Query 110807 ACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTG 110866 | | |||| || || |||||| | ||| | ||||| || ||| | || Sbjct 10562 TATCAGAAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATG 10503 Query 110867 GATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905 ||| | ||| | |||||||||||||||||||| |||| Sbjct 10502 GATCCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGG 10464 >seq259 Length=18911 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943 ||||||| |||| |||| || | ||||||||||| |||||||| || | || || Sbjct 17874 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 17817 Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003 ||||| || ||| | || | || |||| | || | || ||||||||||||| Sbjct 17816 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 17757 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058 |||| |||||||| ||||||| || ||||| |||||| ||||||| ||| || Sbjct 17756 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 17702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186795130582682