Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578285.1_202016-03- 02] 479 sequences; 11,566,949 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq457 107 1e-18 seq435 102 6e-17 seq445 91.5 1e-13 >seq457 Length=55598 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| ||||||| Sbjct 46759 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 46818 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | ||||||||| || || | |||||||| || Sbjct 46819 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 46878 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||||| | || ||| | ||| || | || Sbjct 46879 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 46938 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| || || || || ||||||||||| || Sbjct 46939 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 46970 >seq435 Length=67081 Score = 102 bits (112), Expect = 6e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||||||||||||||||||||| | || ||| ||| ||||||||||| || || Sbjct 31022 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 30963 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| |||| | ||||||||| || || | |||||||| || ||| | | |||| Sbjct 30962 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTG 30903 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||||||| | || ||| | |||||| | || || ||||| || Sbjct 30902 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTC 30843 Query 18309 TTTACAAAA 18317 || |||||| Sbjct 30842 TTGACAAAA 30834 >seq445 Length=60744 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| | |||| |||||| || ||||| ||||| ||||||||||| | || ||| || Sbjct 30897 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 30838 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| | || || || ||| |||| | || ||||||||| || | |||||| Sbjct 30837 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCC 30778 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 || || |||| ||| || | | | ||||| || || || | ||| Sbjct 30777 TTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTG 30718 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| |||| |||||||| || || ||||| || ||||| Sbjct 30717 ATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 30680 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || || || |||||||| |||||||| | || ||| ||| |||||| | ||| Sbjct 31111 GTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTG 31052 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 || || ||| | || | |||||| || || || | |||||||| || ||||| Sbjct 31051 CTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTT 30992 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || || | ||| || | || || || Sbjct 30991 CGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 30932 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 || ||| || |||||||||||||| Sbjct 30931 CAGTGTCTTGACAAAAATTTGCAT 30908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341785460855