Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001578285.1_202016-03-
02] 479 sequences; 11,566,949 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq445 140 5e-28
seq457 120 4e-22
seq381 111 2e-19
seq435 107 3e-18
>seq445
Length=60744
Score = 140 bits (154), Expect = 5e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 30908 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 30967
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || ||||| ||||| || ||||| || |||||||| ||
Sbjct 30968 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 31027
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || |||||| ||||| | || || || |||
Sbjct 31028 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 31087
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || ||||| | || || || || || || |||
Sbjct 31088 AT-TCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 31135
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 30437 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 30496
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 30497 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 30556
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||||| ||||| |||||
Sbjct 30557 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 30616
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
| || ||||| || || || ||| | || | ||| | ||| |||| |||||||
Sbjct 30617 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 30676
Query 156048 GGT 156050
|||
Sbjct 30677 GGT 30679
Score = 122 bits (134), Expect = 1e-22
Identities = 166/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| ||
Sbjct 30680 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 30739
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || || ||||| || ||||| || |||
Sbjct 30740 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAA 30799
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||||||||||||| |||||| ||||| || || || || |
Sbjct 30800 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACA-- 30857
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||| | ||||| |||
Sbjct 30858 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGT 30907
>seq457
Length=55598
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 46970 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 46911
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 46910 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 46851
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 46850 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 46791
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 46790 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 46739
>seq381
Length=79535
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 17199 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 17258
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 17259 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 17318
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
||| |||||||| | ||||| |||||| |||| || || | | ||||||| ||
Sbjct 17319 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACA--ACATCCAAAAGGA 17376
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 17377 ATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 17413
>seq435
Length=67081
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 30835 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 30894
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 30895 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 30954
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 30955 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 31014
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 31015 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 31053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731867617916400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |